* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.2-bioc/meat/rHVDM.Rcheck'
* using R version 2.7.2 (2008-08-25)
* using session charset: ISO8859-1
* checking for file 'rHVDM/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'rHVDM' version '1.6.5'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'rHVDM' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating rHVDM-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating rHVDM-manual.tex ... OK
* checking rHVDM-manual.tex using pdflatex ... OK
installing R.css in E:/biocbld/bbs-2.2-bioc/meat/rHVDM.Rcheck
---------- Making package rHVDM ------------
adding build stamp to DESCRIPTION
installing R files
installing inst files
installing data files
preparing package rHVDM for lazy loading
Loading required package: R2HTML
Loading required package: affy
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: affyio
Loading required package: preprocessCore
Loading required package: minpack.lm
installing man source files
installing indices
not zipping data
installing help
>>> Building/Updating help pages for package 'rHVDM'
Formats: text html latex example chm
HVDMcheck text html latex example chm
HVDMreport text html latex example chm
fitgene text html latex example chm
fiveGyMAS5 text html latex chm
genestoscreen text html latex chm
p53traingenes text html latex chm
screening text html latex example chm
training text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.2-bioc\meat\rHVDM.Rcheck\00_pkg_src\rHVDM\chm\rHVDM.chm
Compile time: 0 minutes, 0 seconds
9 Topics
30 Local links
0 Internet links
1 Graphic
Created e:\biocbld\bbs-2.2-bioc\meat\rHVDM.Rcheck\00_pkg_src\rHVDM\chm\rHVDM.chm, 27,394 bytes
Compression decreased file by 4,300 bytes.
adding MD5 sums
* DONE (rHVDM)