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Package 218/260HostnameOS / ArchBUILDCHECKBUILD BIN
safe 2.2.0
William T. Barry
Snapshot Date: 2008-10-16 00:10:09 -0700 (Thu, 16 Oct 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_2/madman/Rpacks/safe
Last Changed Rev: 31430 / Revision: 34573
Last Changed Date: 2008-04-29 16:50:18 -0700 (Tue, 29 Apr 2008)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64 [ OK ] OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: safe
Version: 2.2.0
Command: E:\biocbld\bbs-2.2-bioc\R\bin\R.exe CMD build safe
StartedAt: 2008-10-16 03:31:12 -0700 (Thu, 16 Oct 2008)
EndedAt: 2008-10-16 03:33:06 -0700 (Thu, 16 Oct 2008)
EllapsedTime: 113.8 seconds
RetCode: 0
Status: OK
PackageFile: safe_2.2.0.tar.gz
PackageFileSize: 518.9 KiB

Command output

* checking for file 'safe/DESCRIPTION' ... OK
* preparing 'safe':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
installing R.css in E:/biocbld/bbs-2.2-bioc/tmpdir/Rinst175625354


---------- Making package safe ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
  preparing package safe for lazy loading
Loading required package: SparseM
Loading required package: GO

******* Deprecation warning *******:

The package 'GO' is deprecated and will not be supported in the future. 

Instead we strongly reccomend that you should start using the 'GO.db' package. 

We hope you will enjoy these new packages.  If you still have questions, you can search 
(http://dir.gmane.org/gmane.science.biology.informatics.conductor) or ask the mailing list 
(http://bioconductor.org/docs/mailList.html).  


Loading required package: annotate
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: xtable
  installing man source files
  installing indices
  installing help
 >>> Building/Updating help pages for package 'safe'
     Formats: text html latex example chm 
  SAFE-class                        text    html    latex           chm
  gene.results                      text    html    latex           chm
  getCmatrix                        text    html    latex   example chm
  safe-internal                     text    html    latex           chm
  safe                              text    html    latex   example chm
  safedag                           text    html    latex           chm
  safeplot                          text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702



Compiling e:\biocbld\bbs-2.2-bioc\meat\safe\chm\safe.chm





Compile time: 0 minutes, 0 seconds

8	Topics

29	Local links

0	Internet links

1	Graphic





Created e:\biocbld\bbs-2.2-bioc\meat\safe\chm\safe.chm, 30,741 bytes

Compression decreased file by 8,811 bytes.

  adding MD5 sums

* DONE (safe)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'safe_2.2.0.tar.gz'