quantsmooth 1.6.0
Jan Oosting
| Snapshot Date: 2008-08-08 00:12:03 -0700 (Fri, 08 Aug 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_2/madman/Rpacks/quantsmooth | | Last Changed Rev: 31430 / Revision: 33132 | | Last Changed Date: 2008-04-29 16:50:18 -0700 (Tue, 29 Apr 2008) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | [ OK ] | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.2-bioc/meat/quantsmooth.Rcheck'
* using R version 2.7.1 (2008-06-23)
* using session charset: ISO8859-1
* checking for file 'quantsmooth/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'quantsmooth' version '1.6.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'quantsmooth' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
grid.chromosome: no visible binding for global variable 'chrom.bands'
lengthChromosome: no visible binding for global variable 'chrom.bands'
paintCytobands: no visible binding for global variable 'chrom.bands'
position2Cytoband: no visible binding for global variable 'chrom.bands'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating quantsmooth-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating quantsmooth-manual.tex ... OK
* checking quantsmooth-manual.tex using pdflatex ... OK
installing R.css in E:/biocbld/bbs-2.2-bioc/meat/quantsmooth.Rcheck
---------- Making package quantsmooth ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
installing R files
installing inst files
installing data files
preparing package quantsmooth for lazy loading
Loading required package: quantreg
Loading required package: SparseM
Loading required package: lodplot
Loading required package: grid
installing man source files
installing indices
not zipping data
installing help
>>> Building/Updating help pages for package 'quantsmooth'
Formats: text html latex example chm
Chromosome14 text html latex chm
drawSimpleChrom text html latex example chm
getChangedIdx text html latex chm
getChangedRegions text html latex example chm
getLambdaMin text html latex example chm
grid.chromosome text html latex example chm
lengthChromosome text html latex example chm
numericCHR text html latex example chm
paintCytobands text html latex example chm
plotChromosome text html latex chm
plotSmoothed text html latex example chm
position2Cytoband text html latex example chm
prepareGenomePlot text html latex chm
quantsmooth text html latex example chm
quantsmooth.cv text html latex example chm
quantsmooth.seg text html latex example chm
scaleto text html latex chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.2-bioc\meat\quantsmooth.Rcheck\00_pkg_src\quantsmooth\chm\quantsmooth.chm
Compile time: 0 minutes, 0 seconds
18 Topics
53 Local links
0 Internet links
1 Graphic
Created e:\biocbld\bbs-2.2-bioc\meat\quantsmooth.Rcheck\00_pkg_src\quantsmooth\chm\quantsmooth.chm, 32,400 bytes
Compression decreased file by 20,162 bytes.
adding MD5 sums
* DONE (quantsmooth)