CGHcall 1.2.0
Sjoerd Vosse
| Snapshot Date: 2008-08-08 00:12:03 -0700 (Fri, 08 Aug 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_2/madman/Rpacks/CGHcall | | Last Changed Rev: 31430 / Revision: 33132 | | Last Changed Date: 2008-04-29 16:50:18 -0700 (Tue, 29 Apr 2008) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | [ OK ] | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.2-bioc/meat/CGHcall.Rcheck'
* using R version 2.7.1 (2008-06-23)
* using session charset: ISO8859-1
* checking for file 'CGHcall/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'CGHcall' version '1.2.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'CGHcall' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating CGHcall-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating CGHcall-manual.tex ... OK
* checking CGHcall-manual.tex using pdflatex ... OK
installing R.css in E:/biocbld/bbs-2.2-bioc/meat/CGHcall.Rcheck
---------- Making package CGHcall ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
installing R files
installing inst files
installing data files
preparing package CGHcall for lazy loading
Loading required package: impute
Loading required package: DNAcopy
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
installing man source files
installing indices
not zipping data
installing help
>>> Building/Updating help pages for package 'CGHcall'
Formats: text html latex example chm
CGHcall-package text html latex chm
CGHcall text html latex example chm
Wilting text html latex chm
chromosomes text html latex chm
class.cghCall text html latex example chm
class.cghRaw text html latex example chm
class.cghSeg text html latex example chm
copynumber text html latex chm
make_cghRaw text html latex example chm
normalize text html latex example chm
plot.summary text html latex example chm
preprocess text html latex example chm
probloss text html latex chm
segmentData text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.2-bioc\meat\CGHcall.Rcheck\00_pkg_src\CGHcall\chm\CGHcall.chm
Compile time: 0 minutes, 0 seconds
15 Topics
105 Local links
0 Internet links
1 Graphic
Created e:\biocbld\bbs-2.2-bioc\meat\CGHcall.Rcheck\00_pkg_src\CGHcall\chm\CGHcall.chm, 35,580 bytes
Compression decreased file by 42,508 bytes.
adding MD5 sums
* DONE (CGHcall)