BioC experimental data: CHECK report for waveTilingData on perceval

Package: waveTilingData

Version: 0.99.3

Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch waveTilingData_0.99.3.tar.gz

StartedAt: 2014-04-04 11:47:15 -0700 (Fri, 04 Apr 2014)

EndedAt: 2014-04-04 11:52:20 -0700 (Fri, 04 Apr 2014)

EllapsedTime: 305.2 seconds

RetCode: 0

Status:  OK

CheckDir: waveTilingData.Rcheck

Warnings: 0

* using log directory ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/waveTilingData.Rcheck’
* using R version 3.0.3 (2014-03-06)
* using platform: x86_64-apple-darwin10.8.0 (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘waveTilingData/DESCRIPTION’ ... OK
* this is package ‘waveTilingData’ version ‘0.99.3’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘waveTilingData’ can be installed ... [3s/13s] OK
* checking installed package size ... NOTE
  installed size is 240.8Mb
  sub-directories of 1Mb or more:
    data  240.8Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... NOTE
  No methods found in "IRanges" for requests: subseq
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [94s/94s] OK
Examples with CPU or elapsed time > 5s
                           user system elapsed
leafdev                  55.415  1.430  56.863
leafdevBQ                24.281  1.069  25.380
leafdevMapAndFilterTAIR9  9.395  0.156   9.554
* checking PDF version of manual ... OK

NOTE: There were 2 notes.
See
  ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/waveTilingData.Rcheck/00check.log’
for details.

* installing *source* package ‘waveTilingData’ ...
** data
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (waveTilingData)

name	user	system	elapsed
leafdev	55.415	1.430	56.863
leafdevBQ	24.281	1.069	25.380
leafdevFit	0.776	0.069	0.888
leafdevInfCompare	0.759	0.073	0.847
leafdevMapAndFilterTAIR9	9.395	0.156	9.554