BioC experimental data: CHECK report for DrugVsDiseasedata on moscato1

Package: DrugVsDiseasedata

Version: 0.99.6

Command: rm -rf DrugVsDiseasedata.buildbin-libdir && mkdir DrugVsDiseasedata.buildbin-libdir && D:\biocbld\bbs-2.13-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=DrugVsDiseasedata.buildbin-libdir DrugVsDiseasedata_0.99.6.tar.gz >DrugVsDiseasedata-install.out 2>&1 && D:\biocbld\bbs-2.13-bioc\R\bin\R.exe CMD check --library=DrugVsDiseasedata.buildbin-libdir --install="check:DrugVsDiseasedata-install.out" --force-multiarch --no-vignettes --timings DrugVsDiseasedata_0.99.6.tar.gz && mv DrugVsDiseasedata.buildbin-libdir/* DrugVsDiseasedata.Rcheck/ && rmdir DrugVsDiseasedata.buildbin-libdir

StartedAt: 2014-04-04 11:28:09 -0700 (Fri, 04 Apr 2014)

EndedAt: 2014-04-04 11:30:15 -0700 (Fri, 04 Apr 2014)

EllapsedTime: 126.1 seconds

RetCode: 0

Status:  OK

CheckDir: DrugVsDiseasedata.Rcheck

Warnings: 0

* using log directory 'D:/biocbld/bbs-2.13-data-experiment/meat/DrugVsDiseasedata.Rcheck'
* using R version 3.0.3 (2014-03-06)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'DrugVsDiseasedata/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'DrugVsDiseasedata' version '0.99.6'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'DrugVsDiseasedata' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... NOTE
prepare_Rd: DrugVsDiseasedata-package.Rd:33-35: Dropping empty section \seealso
prepare_Rd: GEOfactorvalues.Rd:18-20: Dropping empty section \references
prepare_Rd: annotationlist.Rd:17-18: Dropping empty section \source
prepare_Rd: genelist.Rd:14-16: Dropping empty section \source
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... [0s] OK
** running examples for arch 'x64' ... [1s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK

NOTE: There was 1 note.
See
  'D:/biocbld/bbs-2.13-data-experiment/meat/DrugVsDiseasedata.Rcheck/00check.log'
for details.

install for i386

* installing *source* package 'DrugVsDiseasedata' ...
** data
*** moving datasets to lazyload DB
** inst
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'DrugVsDiseasedata' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DrugVsDiseasedata' as DrugVsDiseasedata_0.99.6.zip
* DONE (DrugVsDiseasedata)

name	user	system	elapsed
DrugVsDiseasedata-package	0.03	0.00	0.03
GEOfactorvalues	0	0	0
annotationlist	0	0	0
cytodisease	0	0	0
diseaseClusters	0.02	0.00	0.02
diseaseRL	0	0	0
diseaselabels	0.01	0.00	0.01
genelist	0	0	0

name	user	system	elapsed
DrugVsDiseasedata-package	0.02	0.00	0.02
GEOfactorvalues	0	0	0
annotationlist	0	0	0
cytodisease	0.00	0.02	0.02
diseaseClusters	0.00	0.01	0.02
diseaseRL	0	0	0
diseaselabels	0	0	0
genelist	0	0	0