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Package 132/658HostnameOS / ArchBUILDCHECKBUILD BIN
cn.farms 1.7.4
Andreas Mitterecker
Snapshot Date: 2013-03-23 17:02:20 -0700 (Sat, 23 Mar 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/cn.farms
Last Changed Rev: 74067 / Revision: 74756
Last Changed Date: 2013-03-08 04:57:49 -0800 (Fri, 08 Mar 2013)
george2 Linux (Ubuntu 12.04.1 LTS) / x86_64  OK  OK 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
petty Mac OS X Leopard (10.5.8) / i386  OK  WARNINGS  OK 
pelham Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK [ OK ]

Summary

Package: cn.farms
Version: 1.7.4
Command: rm -rf cn.farms.buildbin-libdir && mkdir cn.farms.buildbin-libdir && /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL --build --no-multiarch --library=cn.farms.buildbin-libdir cn.farms_1.7.4.tar.gz
StartedAt: 2013-03-24 11:32:08 -0700 (Sun, 24 Mar 2013)
EndedAt: 2013-03-24 11:32:33 -0700 (Sun, 24 Mar 2013)
EllapsedTime: 24.7 seconds
RetCode: 0
Status:  OK 
PackageFile: cn.farms_1.7.4.tgz
PackageFileSize: 2.245 MiB

Command output

* installing *source* package 'cn.farms' ...
** libs
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2  -c R_init_cnfarms.c -o R_init_cnfarms.o
llvm-g++-4.2 -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2  -c laplace.cpp -o laplace.o
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2  -c sparse_farms.c -o sparse_farms.o
llvm-g++-4.2 -arch x86_64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o cn.farms.so R_init_cnfarms.o laplace.o sparse_farms.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.12-bioc/meat/cn.farms.buildbin-libdir/cn.farms/libs
** R
** demo
** inst
** preparing package for lazy loading
'.find.package' is deprecated.
Use 'find.package' instead.
See help("Deprecated")
'.find.package' is deprecated.
Use 'find.package' instead.
See help("Deprecated")
'.find.package' is deprecated.
Use 'find.package' instead.
See help("Deprecated")
** help
*** installing help indices
** building package indices
** installing vignettes
   'cn.farms.Rnw' using 'UTF-8' 
** testing if installed package can be loaded
'.find.package' is deprecated.
Use 'find.package' instead.
See help("Deprecated")
'.find.package' is deprecated.
Use 'find.package' instead.
See help("Deprecated")
'.find.package' is deprecated.
Use 'find.package' instead.
See help("Deprecated")
packaged installation of 'cn.farms' as 'cn.farms_1.7.4.tgz'
* DONE (cn.farms)