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GWASdata 1.0.7
Stephanie Gogarten
Snapshot Date: 2013-03-24 09:15:27 -0700 (Sun, 24 Mar 2013)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/GWASdata
Last Changed Rev: 2184 / Revision: 2286
Last Changed Date: 2012-12-06 10:30:19 -0800 (Thu, 06 Dec 2012)
lamb1 Linux (openSUSE 12.1) / x86_64  OK [ WARNINGS ]
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  WARNINGS  OK 
perceval Mac OS X Leopard (10.5.8) / i386  OK  WARNINGS  OK 

Summary

Package: GWASdata
Version: 1.0.7
Command: /home/biocbuild/bbs-2.11-bioc/R/bin/R CMD check --no-vignettes --timings GWASdata_1.0.7.tar.gz
StartedAt: 2013-03-24 12:35:44 -0700 (Sun, 24 Mar 2013)
EndedAt: 2013-03-24 12:36:07 -0700 (Sun, 24 Mar 2013)
EllapsedTime: 22.5 seconds
RetCode: 0
Status:  WARNINGS 
CheckDir: GWASdata.Rcheck
Warnings: 1

Command output

* using log directory ‘/loc/home/biocbuild/bbs-2.11-data-experiment/meat/GWASdata.Rcheck’
* using R version 2.15.3 (2013-03-01)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘GWASdata/DESCRIPTION’ ... OK
* this is package ‘GWASdata’ version ‘1.0.7’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package ‘GWASdata’ can be installed ... OK
* checking installed package size ... NOTE
  installed size is 12.6Mb
  sub-directories of 1Mb or more:
    extdata  12.0Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... WARNING
checkRd: (7) GWASdata-package.Rd:76: Tag \code is invalid in a \code block
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking PDF version of manual ... OK

WARNING: There was 1 warning.
NOTE: There was 1 note.
See
  ‘/loc/home/biocbuild/bbs-2.11-data-experiment/meat/GWASdata.Rcheck/00check.log’
for details.

GWASdata.Rcheck/00install.out:

* installing *source* package ‘GWASdata’ ...
** data
** inst
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded

* DONE (GWASdata)

GWASdata.Rcheck/GWASdata-Ex.timings:

nameusersystemelapsed
GWASdata-package0.0920.0120.144