flowCore 1.4.0
Nolwenn Le Meur
| Snapshot Date: 2008-04-09 12:13:20 -0700 (Wed, 09 Apr 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/flowCore | | Last Changed Rev: 27709 / Revision: 30966 | | Last Changed Date: 2007-10-02 17:41:09 -0700 (Tue, 02 Oct 2007) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| lemming | Windows Server 2003 (32-bit) / x64 | OK | OK | [ OK ] |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
installing R.css in D:/biocbld/bbs-2.1-bioc/meat/flowCore.buildbin-libdir
Using auto-selected zip options 'flowCore-ZIPDATA=zip flowCore-HELP=ziponly'
---------- Making package flowCore ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
making DLL ...
making biexponential.d from biexponential.c
making inPolygon.d from inPolygon.c
gcc-sjlj -std=gnu99 -ID:/biocbld/bbs-2.1-bioc/R/include -O3 -Wall -c biexponential.c -o biexponential.o
gcc-sjlj -std=gnu99 -ID:/biocbld/bbs-2.1-bioc/R/include -O3 -Wall -c inPolygon.c -o inPolygon.o
windres --preprocessor="gcc-sjlj -E -xc -DRC_INVOKED" -I D:/biocbld/bbs-2.1-bioc/R/include -i flowCore_res.rc -o flowCore_res.o
gcc-sjlj -std=gnu99 -shared -s -o flowCore.dll flowCore.def biexponential.o inPolygon.o flowCore_res.o -LD:/biocbld/bbs-2.1-bioc/R/bin -lR
... DLL made
installing DLL
installing R files
installing inst files
installing data files
installing man source files
installing indices
zipping data
installing help
>>> Building/Updating help pages for package 'flowCore'
Formats: text html latex example chm
GvHD text html latex chm
KmeansFilter text html latex example chm
Subset-methods text html latex example chm
arcsinhTransform text html latex example chm
biexponentialTransform text html latex example chm
coerce text html latex example chm
compensate text html latex example chm
concreteFilter-class text html latex chm
each_col text html latex example chm
ellipsoidGate text html latex example chm
expressionFilter-class text html latex chm
filter-and-methods text html latex chm
filter-class text html latex chm
filter-in-methods text html latex example chm
filter-on-methods text html latex example chm
filter text html latex example chm
filterDetails-methods text html latex chm
filterReference-class text html latex example chm
filterResult-class text html latex example chm
filterSet-class text html latex example chm
flowFrame-class text html latex chm
flowSet-class text html latex example chm
flowSet text html latex chm
fsApply text html latex example chm
identifier text html latex example chm
keyword-methods text html latex example chm
linearTransform text html latex example chm
lnTransform text html latex example chm
logTransform text html latex example chm
logicalFilterResult-class text html latex example chm
logicleTransform text html latex example chm
manyFilterResult-class text html latex example chm
multipleFilterResult-class text html latex example chm
norm2Filter-class text html latex example chm
parameterFilter-class text html latex chm
parameters text html latex example chm
print.filterSummary text html latex example chm
quadraticTransform text html latex example chm
randomFilterResult-class text html latex chm
read.FCS text html latex example chm
read.FCSheader text html latex example chm
read.flowSet text html latex example chm
rectangleGate text html latex example chm
sampleFilter-class text html latex example chm
sampleFilter text html latex example chm
scaleTransform text html latex example chm
setOperationFilter-class text html latex chm
spillover-flowSet text html latex chm
splitScaleTransform text html latex example chm
transform-class text html latex example chm
transformFilter-class text html latex example chm
transformList-class text html latex example chm
transformMap-class text html latex example chm
truncateTransform text html latex example chm
zipping help files
HHC5012: Error: Cannot create a temporary file in your TEMP path.
HHC4016: Warning: Cannot open "s Resource Kits\Tools\;c:\Program Files\Affymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".
Microsoft HTML Help Compiler 4.74.8702
Compiling d:\biocbld\bbs-2.1-bioc\meat\R.INSTALL.5512\flowCore\chm\flowCore.chm
HHC4016: Warning: Cannot open "s Resource Kits\Tools\;c:\Program Files\Affymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".
The following files were not compiled:
preparing package flowCore for lazy loading
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: rrcov
Loading required package: robustbase
Attaching package: 'rrcov'
The following object(s) are masked from package:stats :
biplot,
predict,
screeplot
KernSmooth 2.22 installed
Copyright M. P. Wand 1997
Creating a new generic function for "colnames" in "flowCore"
Creating a new generic function for "colnames<-" in "flowCore"
Creating a new generic function for "nrow" in "flowCore"
Creating a new generic function for "ncol" in "flowCore"
adding MD5 sums
packaged installation of package 'flowCore' as flowCore_1.4.0.zip
* DONE (flowCore)