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Package 45/233HostnameOS / ArchBUILDCHECKBUILD BIN
cellHTS2 2.2.5
Ligia Bras
Snapshot Date: 2008-04-09 12:13:20 -0700 (Wed, 09 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/cellHTS2
Last Changed Rev: 28949 / Revision: 30966
Last Changed Date: 2007-11-28 07:37:23 -0800 (Wed, 28 Nov 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64 [ OK ] OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: cellHTS2
Version: 2.2.5
Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD build cellHTS2
StartedAt: 2008-04-09 17:33:17 -0700 (Wed, 09 Apr 2008)
EndedAt: 2008-04-09 17:37:03 -0700 (Wed, 09 Apr 2008)
EllapsedTime: 226.1 seconds
RetCode: 0
Status: OK
PackageFile: cellHTS2_2.2.5.tar.gz
PackageFileSize: 3.967 MiB

Command output

* checking for file 'cellHTS2/DESCRIPTION' ... OK
* preparing 'cellHTS2':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
installing R.css in D:/biocbld/bbs-2.1-bioc/tmpdir/Rinst613277200


---------- Making package cellHTS2 ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'cellHTS2'
     Formats: text html latex example chm 
  Bscore                            text    html    latex   example chm
  Data                              text    html    latex           chm
  ROC-class                         text    html    latex   example chm
  ROC                               text    html    latex   example chm
  annotate                          text    html    latex   example chm
  batch                             text    html    latex           chm
  bdgpbiomart                       text    html    latex   example chm
  cellHTS-class                     text    html    latex   example chm
  cellHTS2                          text    html    latex           chm
  configurationAsScreenPlot         text    html    latex   example chm
  configure                         text    html    latex   example chm
  convertOldCellHTS                 text    html    latex   example chm
  convertWellCoordinates            text    html    latex   example chm
  data-KcViab                       text    html    latex   example chm
  data-KcViabSmall                  text    html    latex   example chm
  data-dualCh                       text    html    latex   example chm
  data-oldKcViabSmall               text    html    latex   example chm
  getDynamicRange                   text    html    latex   example chm
  getEnVisionRawData                text    html    latex   example chm
  getMeasureRepAgreement            text    html    latex   example chm
  getTopTable                       text    html    latex   example chm
  getZfactor                        text    html    latex   example chm
  imageScreen                       text    html    latex   example chm
  intensityFiles                    text    html    latex           chm
  normalizePlates                   text    html    latex   example chm
  oneRowPerId                       text    html    latex   example chm
  plate                             text    html    latex           chm
  plateEffects                      text    html    latex           chm
  plotSpatialEffects                text    html    latex   example chm
  readHTAnalystData                 text    html    latex   example chm
  readPlateList                     text    html    latex   example chm
  scoreReplicates                   text    html    latex   example chm
  scores2calls                      text    html    latex   example chm
  spatialNormalization              text    html    latex   example chm
  state                             text    html    latex           chm
  summarizeChannels                 text    html    latex   example chm
  summarizeReplicates               text    html    latex   example chm
  wellAnno                          text    html    latex           chm
  write.tabdel                      text    html    latex   example chm
  writeReport                       text    html    latex   example chm
  writeTab                          text    html    latex   example chm
HHC5012: Error: Cannot create a temporary file in your TEMP path.

HHC4016: Warning: Cannot open "51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".

Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\bbs-2.1-bioc\meat\cellHTS2\chm\cellHTS2.chm



HHC4016: Warning: Cannot open "51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".





The following files were not compiled:

  preparing package cellHTS2 for lazy loading
Loading required package: prada
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: RColorBrewer
Loading required package: grid
Loading required package: rrcov
Loading required package: robustbase

Attaching package: 'rrcov'


	The following object(s) are masked from package:stats :

	 biplot,
	 predict,
	 screeplot 

KernSmooth 2.22 installed
Copyright M. P. Wand 1997
Loading required package: genefilter
Loading required package: survival
Loading required package: splines

Attaching package: 'survival'


	The following object(s) are masked from package:robustbase :

	 heart 

Loading required package: splots
Loading required package: vsn
Loading required package: affy
Loading required package: affyio
Loading required package: preprocessCore
Loading required package: limma
  adding MD5 sums

* DONE (cellHTS2)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'cellHTS2_2.2.5.tar.gz'