Back to the "Multiple platform build/check report" A [B] C  D  E  F  G  H  I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

Package 39/233HostnameOS / ArchBUILDCHECKBUILD BIN
BSgenome 1.6.2
H. Pages
Snapshot Date: 2008-04-09 12:13:20 -0700 (Wed, 09 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/BSgenome
Last Changed Rev: 29241 / Revision: 30966
Last Changed Date: 2007-12-18 11:21:37 -0800 (Tue, 18 Dec 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64  OK  OK [ OK ]
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: BSgenome
Version: 1.6.2
Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD INSTALL --build --library=BSgenome.buildbin-libdir BSgenome_1.6.2.tar.gz
StartedAt: 2008-04-09 22:52:41 -0700 (Wed, 09 Apr 2008)
EndedAt: 2008-04-09 22:53:30 -0700 (Wed, 09 Apr 2008)
EllapsedTime: 48.6 seconds
RetCode: 0
Status: OK
PackageFile: BSgenome_1.6.2.zip
PackageFileSize: 91.26 KiB

Command output

installing R.css in D:/biocbld/bbs-2.1-bioc/meat/BSgenome.buildbin-libdir

Using auto-selected zip options ''

---------- Making package BSgenome ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  preparing package BSgenome for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: Biostrings
  installing man source files
  installing indices
  installing help
 >>> Building/Updating help pages for package 'BSgenome'
     Formats: text html latex example chm 
  BSgenome-class                    text    html    latex   example chm
  available.genomes                 text    html    latex   example chm
  buildDataFiles                    text    html    latex   example chm
  getSeq                            text    html    latex   example chm
HHC5012: Error: Cannot create a temporary file in your TEMP path.

HHC4016: Warning: Cannot open "am Files\Windows Resource Kits\Tools\;c:\Program Files\Affymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".

Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\bbs-2.1-bioc\meat\R.INSTALL.3836\BSgenome\chm\BSgenome.chm



HHC4016: Warning: Cannot open "am Files\Windows Resource Kits\Tools\;c:\Program Files\Affymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".





The following files were not compiled:

  adding MD5 sums

packaged installation of package 'BSgenome' as BSgenome_1.6.2.zip
* DONE (BSgenome)