Package: panp

Version: 1.8.0

Command: /home/biocbuild/bbs-2.1-bioc/R/bin/R CMD check panp_1.8.0.tar.gz

RetCode: 0

Time: 40.6 seconds

Status: OK

CheckDir: panp.Rcheck

Warnings: 0

* checking for working latex ... OK
* using log directory '/home/biocbuild/bbs-2.1-bioc/meat/panp.Rcheck'
* using R version 2.6.0 (2007-10-03)
* checking for file 'panp/DESCRIPTION' ... OK
* this is package 'panp' version '1.8.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'panp' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
pa.calls: no visible binding for global variable 'NSMPnames.hgu133a'
pa.calls: no visible binding for global variable
  'NSMPnames.hgu133plus2'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating panp-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating panp-manual.tex ... OK
* checking panp-manual.tex ... OK

* Installing *source* package 'panp' ...
** R
** data
** inst
** help
 >>> Building/Updating help pages for package 'panp'
     Formats: text html latex example 
  NSMPnames.hgu133a                 text    html    latex
  NSMPnames.hgu133plus2             text    html    latex
  gcrma.ExpressionSet               text    html    latex
  pa.calls                          text    html    latex   example
** building package indices ...
* DONE (panp)