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AffyExpress 1.2.0
Xuejun Arthur Li
Last Changed Date: 2007-10-02 17:41:09 -0700
Last Changed Rev: 27709
lamb1 Linux (SUSE 10.1) x86_64  OK  OK 
wellington Linux (SUSE 9.2) i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) x64  OK  OK  OK 
pitt Mac OS X (10.4.10) i386  OK [ OK ] OK 
Package: AffyExpress
Version: 1.2.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check AffyExpress_1.2.0.tar.gz
RetCode: 0
Time: 355.5 seconds
Status: OK
CheckDir: AffyExpress.Rcheck
Warnings: 0

Command output

* checking for working latex ... OK
* using log directory '/Users/biocbuild/bbs-2.1-bioc/meat/AffyExpress.Rcheck'
* using R version 2.6.0 (2007-10-03)
* checking for file 'AffyExpress/DESCRIPTION' ... OK
* this is package 'AffyExpress' version '1.2.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'AffyExpress' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating AffyExpress-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating AffyExpress-manual.tex ... OK
* checking AffyExpress-manual.tex ... OK

AffyExpress.Rcheck/00install.out:

* Installing *source* package 'AffyExpress' ...
** R
** data
** inst
** help
 >>> Building/Updating help pages for package 'AffyExpress'
     Formats: text html latex example 
  AffyInteraction                   text    html    latex   example
  AffyQA                            text    html    latex   example
  AffyRegress                       text    html    latex   example
  Filter                            text    html    latex   example
  interaction.result2html           text    html    latex   example
  make.contrast                     text    html    latex   example
  make.design                       text    html    latex   example
  post.interaction                  text    html    latex   example
  pre.process                       text    html    latex   example
  regress                           text    html    latex   example
  result2html                       text    html    latex   example
  select.sig.gene                   text    html    latex   example
  testData                          text    html    latex
** building package indices ...
* DONE (AffyExpress)