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| NOTES: (1) a maintainance reboot of lemming prevented these builds to complete on this machine (2) these are the last builds with R 2.6.0 (2007-06-03 r41797) on lamb1 and lemming, next builds will be with R 2.6.0 (2007-06-10 r41908) configured with --enable-strict-barrier |
| Package 235/238 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
webbioc1.9.0Colin A. SmithLast Changed Date: 2007-05-11 21:56:41 -0700 Last Changed Rev: 24616 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | OK | |
| wellington | Linux (SUSE 9.2) | i686 | OK | OK | ||
| churchill | Solaris 2.9 | sparc | OK | [ OK ] | ||
| lemming | Windows Server 2003 (32-bit) | x64 | OK | skipped | skipped |
| Package: webbioc |
| Version: 1.9.0 |
| Command: /loc/biocbuild/bbs-2.1-bioc/R/bin/R CMD check webbioc_1.9.0.tar.gz |
| RetCode: 0 |
| Time: 163.0 seconds |
| Status: OK |
| CheckDir: webbioc.Rcheck |
| Warnings: 0 |
* checking for working latex ... OK * using log directory '/loc/biocbuild/bbs-2.1-bioc/meat/webbioc.Rcheck' * using R version 2.6.0 Under development (unstable) (2007-06-03 r41797) * checking for file 'webbioc/DESCRIPTION' ... OK * this is package 'webbioc' version '1.9.0' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'webbioc' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * creating webbioc-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating webbioc-manual.tex ... OK * checking webbioc-manual.tex ... OK
webbioc.Rcheck/00install.out:
* Installing *source* package 'webbioc' ...
** R
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: affy
Loading required package: affyio
Loading required package: preprocessCore
Loading required package: multtest
Loading required package: survival
Loading required package: splines
Loading required package: annaffy
Loading required package: GO
Loading required package: KEGG
Loading required package: vsn
Loading required package: limma
Loading required package: gcrma
Loading required package: matchprobes
Loading required package: qvalue
** help
Note: unmatched right brace in 'mt.wrapper' on or after line 84
>>> Building/Updating help pages for package 'webbioc'
Formats: text html latex example
installReps text html latex
mt.wrapper text html latex
** building package indices ...
* DONE (webbioc)