Back to the "Multiple platform build/check report"
| NOTES: (1) a maintainance reboot of lemming prevented these builds to complete on this machine (2) these are the last builds with R 2.6.0 (2007-06-03 r41797) on lamb1 and lemming, next builds will be with R 2.6.0 (2007-06-10 r41908) configured with --enable-strict-barrier |
| Package 230/238 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
topGO1.3.0Adrian AlexaLast Changed Date: 2007-04-24 11:31:42 -0700 Last Changed Rev: 24217 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | OK | |
| wellington | Linux (SUSE 9.2) | i686 | OK | OK | ||
| churchill | Solaris 2.9 | sparc | OK | OK | ||
| lemming | Windows Server 2003 (32-bit) | x64 | [ OK ] | skipped | skipped |
| Package: topGO |
| Version: 1.3.0 |
| Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD build topGO |
| RetCode: 0 |
| Time: 135.6 seconds |
| Status: OK |
| PackageFile: topGO_1.3.0.tar.gz |
* checking for file 'topGO/DESCRIPTION' ... OK
* preparing 'topGO':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
installing R.css in D:/biocbld/bbs-2.1-bioc/tmpdir/Rinst531228445
---------- Making package topGO ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
installing R files
installing inst files
installing data files
installing man source files
installing indices
not zipping data
installing help
Note: unmatched right brace in 'buildGOgraph.topology' on or after line 21
Note: unmatched right brace in 'buildGOgraph.topology.Rd' on or after line 21
Note: unmatched right brace in 'classicScore-class' on or after line 69
Note: unmatched right brace in 'classicScore-class.Rd' on or after line 69
>>> Building/Updating help pages for package 'topGO'
Formats: text html latex example chm
GOFisherTest text html latex chm
GOKSTest text html latex chm
GOdata text html latex example chm
annFUN.hgu text html latex example chm
buildGOgraph.topology text html latex chm
buildLevels text html latex example chm
classicCount-class text html latex example chm
classicScore-class text html latex example chm
elimCount-class text html latex example chm
elimScore-class text html latex example chm
getPvalues text html latex example chm
getSigGroups text html latex example chm
groupGOTerms text html latex example chm
groupStats-class text html latex example chm
inducedGraph text html latex example chm
mapGenes2GOgraph text html latex example chm
printGenes-methods text html latex chm
printGraph-methods text html latex example chm
reverseArch text html latex example chm
topGO-package text html latex chm
topGOdata-class text html latex example chm
topGOresult-class text html latex chm
weightCount-class text html latex example chm
weightScore-class text html latex chm
Microsoft HTML Help Compiler 4.74.8702
Compiling d:\biocbld\bbs-2.1-bioc\meat\topGO\chm\topGO.chm
Compile time: 0 minutes, 0 seconds
25 Topics
321 Local links
0 Internet links
1 Graphic
Created d:\biocbld\bbs-2.1-bioc\meat\topGO\chm\topGO.chm, 42,432 bytes
Compression decreased file by 104,011 bytes.
preparing package topGO for lazy loading
Loading required package: graph
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: GO
Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: SparseM
Creating a new generic function for "print" in "topGO"
adding MD5 sums
* DONE (topGO)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source files
* checking for empty or unneeded directories
* building 'topGO_1.3.0.tar.gz'