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| NOTES: (1) a maintainance reboot of lemming prevented these builds to complete on this machine (2) these are the last builds with R 2.6.0 (2007-06-03 r41797) on lamb1 and lemming, next builds will be with R 2.6.0 (2007-06-10 r41908) configured with --enable-strict-barrier |
| Package 169/238 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
plgem1.9.0Mattia PelizzolaLast Changed Date: 2007-04-24 11:31:42 -0700 Last Changed Rev: 24217 | lamb1 | Linux (SUSE 10.1) | x86_64 | ERROR | skipped | |
| wellington | Linux (SUSE 9.2) | i686 | ERROR | skipped | ||
| churchill | Solaris 2.9 | sparc | ERROR | skipped | ||
| lemming | Windows Server 2003 (32-bit) | x64 | [ ERROR ] | skipped | skipped |
| Package: plgem |
| Version: 1.9.0 |
| Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD build plgem |
| RetCode: 1 |
| Time: 10.5 seconds |
| Status: ERROR |
| PackageFile: None |
* checking for file 'plgem/DESCRIPTION' ... OK
* preparing 'plgem':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
installing R.css in D:/biocbld/bbs-2.1-bioc/tmpdir/Rinst441603604
---------- Making package plgem ------------
adding build stamp to DESCRIPTION
installing R files
installing inst files
installing data files
installing man source files
installing indices
not zipping data
installing help
>>> Building/Updating help pages for package 'plgem'
Formats: text html latex example chm
LPSeset text html latex example chm
plgem.deg text html latex example chm
plgem.fit text html latex example chm
plgem.obsStn text html latex example chm
run.plgem text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling d:\biocbld\bbs-2.1-bioc\meat\plgem\chm\plgem.chm
Compile time: 0 minutes, 0 seconds
6 Topics
25 Local links
5 Internet links
1 Graphic
Created d:\biocbld\bbs-2.1-bioc\meat\plgem\chm\plgem.chm, 25,068 bytes
Compression decreased file by 2,016 bytes.
adding MD5 sums
* DONE (plgem)
* creating vignettes ... ERROR
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: MASS
Error: processing vignette 'plgem.Rnw' failed with diagnostics:
chunk 1 (label=PLGEMwrapper)
Error in run.plgem(esdata = LPSeset) :
At least 2 conditions are needed in object esdata for function run.plgem
Execution halted