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NOTES: (1) a maintainance reboot of lemming prevented these builds to complete on this machine (2) these are the last builds with R 2.6.0 (2007-06-03 r41797) on lamb1 and lemming, next builds will be with R 2.6.0 (2007-06-10 r41908) configured with --enable-strict-barrier |
Package 35/238 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
biomaRt1.11.3Steffen DurinckLast Changed Date: 2007-05-11 21:56:41 -0700 Last Changed Rev: 24616 | lamb1 | Linux (SUSE 10.1) | x86_64 | ERROR | skipped | |
wellington | Linux (SUSE 9.2) | i686 | ERROR | skipped | ||
churchill | Solaris 2.9 | sparc | ERROR | skipped | ||
lemming | Windows Server 2003 (32-bit) | x64 | [ OK ] | WARNINGS | skipped |
Package: biomaRt |
Version: 1.11.3 |
Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD build biomaRt |
RetCode: 0 |
Time: 114.4 seconds |
Status: OK |
PackageFile: biomaRt_1.11.3.tar.gz |
* checking for file 'biomaRt/DESCRIPTION' ... OK * preparing 'biomaRt': * checking DESCRIPTION meta-information ... OK * installing the package to re-build vignettes installing R.css in D:/biocbld/bbs-2.1-bioc/tmpdir/Rinst492852014 ---------- Making package biomaRt ------------ adding build stamp to DESCRIPTION installing NAMESPACE file and metadata installing R files preparing package biomaRt for lazy loading Loading required package: XML Loading required package: RCurl installing inst files installing man source files installing indices installing help Note: unmatched right brace in 'getGene' on or after line 33 Note: unmatched right brace in 'getGene.Rd' on or after line 33 Note: unmatched right brace in 'getHomolog' on or after line 44 Note: unmatched right brace in 'getHomolog.Rd' on or after line 44 >>> Building/Updating help pages for package 'biomaRt' Formats: text html latex example chm Mart-class text html latex chm attributeSummary text html latex example chm exportFASTA text html latex example chm filterOptions text html latex example chm filterSummary text html latex example chm filterType text html latex example chm getAffyArrays text html latex example chm getBM text html latex example chm getFeature text html latex example chm getGO text html latex example chm getGene text html latex example chm getHomolog text html latex example chm getLDS text html latex example chm getSNP text html latex example chm getSequence text html latex example chm listAttributes text html latex example chm listDatasets text html latex example chm listFilters text html latex example chm listMarts text html latex example chm martDisconnect text html latex example chm parseAttributes text html latex chm parseFilters text html latex chm useDataset text html latex example chm useMart text html latex example chm Microsoft HTML Help Compiler 4.74.8702 Compiling d:\biocbld\bbs-2.1-bioc\meat\biomaRt\chm\biomaRt.chm Compile time: 0 minutes, 0 seconds 25 Topics 48 Local links 7 Internet links 1 Graphic Created d:\biocbld\bbs-2.1-bioc\meat\biomaRt\chm\biomaRt.chm, 34,894 bytes Compression decreased file by 31,136 bytes. adding MD5 sums * DONE (biomaRt) * creating vignettes ... OK * removing junk files * checking for LF line-endings in source files * checking for empty or unneeded directories * building 'biomaRt_1.11.3.tar.gz'