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| NOTES: (1) a maintainance reboot of lemming prevented these builds to complete on this machine (2) these are the last builds with R 2.6.0 (2007-06-03 r41797) on lamb1 and lemming, next builds will be with R 2.6.0 (2007-06-10 r41908) configured with --enable-strict-barrier |
| Package 8/238 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
affycoretools1.9.1James W. MacDonaldLast Changed Date: 2007-05-16 13:30:28 -0700 Last Changed Rev: 24723 | lamb1 | Linux (SUSE 10.1) | x86_64 | ERROR | skipped | |
| wellington | Linux (SUSE 9.2) | i686 | ERROR | skipped | ||
| churchill | Solaris 2.9 | sparc | [ ERROR ] | skipped | ||
| lemming | Windows Server 2003 (32-bit) | x64 | OK | WARNINGS | skipped |
| Package: affycoretools |
| Version: 1.9.1 |
| Command: /loc/biocbuild/bbs-2.1-bioc/R/bin/R CMD build affycoretools |
| RetCode: 1 |
| Time: 16.8 seconds |
| Status: ERROR |
| PackageFile: None |
* checking for file 'affycoretools/DESCRIPTION' ... OK
* preparing 'affycoretools':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'affycoretools' ...
** R
** inst
** preparing package for lazy loading
Loading required package: affy
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: affyio
Loading required package: preprocessCore
Loading required package: limma
Loading required package: GOstats
Loading required package: graph
Loading required package: GO
Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: RBGL
Loading required package: Category
Loading required package: KEGG
Loading required package: genefilter
Loading required package: survival
Loading required package: splines
Loading required package: biomaRt
Warning in library(pkg, character.only = TRUE, logical.return = TRUE, lib.loc = lib.loc) :
there is no package called 'biomaRt'
Error: package 'biomaRt' could not be loaded
Execution halted
ERROR: lazy loading failed for package 'affycoretools'
** Removing '/tmp/Rinst2110333983/affycoretools'
ERROR
Installation failed.
Removing '/tmp/Rinst2110333983'