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NOTES: (1) a maintainance reboot of lemming prevented these builds to complete on this machine (2) these are the last builds with R 2.6.0 (2007-06-03 r41797) on lamb1 and lemming, next builds will be with R 2.6.0 (2007-06-10 r41908) configured with --enable-strict-barrier
Package 7/238HostnameOSArchBUILDCHECKBUILD BIN

affycomp

1.13.0

Rafael A. Irizarry
Last Changed Date: 2007-04-24 11:31:42 -0700
Last Changed Rev: 24217
lamb1 Linux (SUSE 10.1) x86_64  OK  OK 
wellington Linux (SUSE 9.2) i686 [ OK ] OK 
churchill Solaris 2.9 sparc  OK  OK 
lemming Windows Server 2003 (32-bit) x64  OK  OK skipped
Package: affycomp
Version: 1.13.0
Command: /loc/biocbuild/bbs-2.1-bioc/R/bin/R CMD build affycomp
RetCode: 0
Time: 69.9 seconds
Status: OK
PackageFile: affycomp_1.13.0.tar.gz

Command output

* checking for file 'affycomp/DESCRIPTION' ... OK
* preparing 'affycomp':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'affycomp' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

** help
Note: unmatched right brace in 'affycomp.table' on or after line 70
Note: unmatched right brace in 'affycompPlot' on or after line 10
Note: unmatched right brace in 'readin' on or after line 30
Note: unmatched right brace in 'remove.hgu133a.xhyb' on or after line 7
 >>> Building/Updating help pages for package 'affycomp'
     Formats: text html latex example 
  SD                                text    html    latex   example
  affycomp.compfigs.auxiliary       text    html    latex   example
  affycomp.figures.auxiliary        text    html    latex   example
  affycomp.table                    text    html    latex   example
  affycompPlot                      text    html    latex   example
  assessAll                         text    html    latex
  assessDilution                    text    html    latex
  assessSD                          text    html    latex
  assessSpikeIn                     text    html    latex
  assessSpikeIn2                    text    html    latex
  dilution.phenodata                text    html    latex
  exprset.log                       text    html    latex
  hgu133a.spikein.phenodata         text    html    latex
  lw.sd.assessment                  text    html    latex
  mas5.assessment                   text    html    latex
  readin                            text    html    latex
  remove.hgu133a.xhyb               text    html    latex
  rma.assessment                    text    html    latex
  rma.sd.assessment                 text    html    latex
  spikein.phenodata                 text    html    latex
  xhyb                              text    html    latex
** building package indices ...
* DONE (affycomp)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source files
* checking for empty or unneeded directories
* building 'affycomp_1.13.0.tar.gz'