Package: oneChannelGUI

Version: 1.3.5

Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD check oneChannelGUI_1.3.5.tar.gz

RetCode: 0

Time: 189.4 seconds

Status: OK

CheckDir: oneChannelGUI.Rcheck

Warnings: 0

* checking for working latex ... OK
* using log directory 'D:/biocbld/bbs-2.1-bioc/meat/oneChannelGUI.Rcheck'
* using R version 2.6.0 Under development (unstable) (2007-04-17 r41210)
* checking for file 'oneChannelGUI/DESCRIPTION' ... OK
* this is package 'oneChannelGUI' version '1.3.5'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'oneChannelGUI' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating oneChannelGUI-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating oneChannelGUI-manual.tex ... OK
* checking oneChannelGUI-manual.tex ... OK

installing R.css in D:/biocbld/bbs-2.1-bioc/meat/oneChannelGUI.Rcheck


---------- Making package oneChannelGUI ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
  installing man source files
  installing indices
  installing help
 >>> Building/Updating help pages for package 'oneChannelGUI'
     Formats: text html latex example chm 
  GOenrichment                      text    html    latex   example chm
  IPAlistFilter                     text    html    latex   example chm
  ML.edesign                        text    html    latex   example chm
  OpenLargefiles                    text    html    latex   example chm
  PLM.plots                         text    html    latex   example chm
  PlotOptionsv1                     text    html    latex   example chm
  VennDiagram                       text    html    latex   example chm
  delPLM                            text    html    latex   example chm
  dfMAplot                          text    html    latex   example chm
  extractAffyids                    text    html    latex   example chm
  inspecting.one.splice.index       text    html    latex   example chm
  inspecting.splice.index           text    html    latex   example chm
  intensityFilter                   text    html    latex   example chm
  iqrFilter                         text    html    latex   example chm
  listFilter                        text    html    latex   example chm
  masigpro                          text    html    latex   example chm
  masigpro.edesign                  text    html    latex   example chm
  masigpro.view                     text    html    latex   example chm
  myExpresso                        text    html    latex   example chm
  myPLM                             text    html    latex   example chm
  ocPlotHist                        text    html    latex   example chm
  ocPlotPCA                         text    html    latex   example chm
  oneChannelGUI-package             text    html    latex   example chm
  oneChannelGUI                     text    html    latex   example chm
  plotGO                            text    html    latex   example chm
  rawpCheck                         text    html    latex   example chm
  sample.size.evaluation            text    html    latex   example chm
  sample.size.evaluation1           text    html    latex   example chm
  showDataset                       text    html    latex   example chm
  showTopTable                      text    html    latex   example chm
  siggenes                          text    html    latex   example chm
  spliceIndex                       text    html    latex   example chm
  targetWidget                      text    html    latex   example chm
  templA                            text    html    latex   example chm
  trainTest                         text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling d:\biocbld\bbs-2.1-bioc\meat\oneChannelGUI.Rcheck\00_pkg_src\oneChannelGUI\chm\oneChannelGUI.chm


Compile time: 0 minutes, 0 seconds
36	Topics
92	Local links
0	Internet links
1	Graphic


Created d:\biocbld\bbs-2.1-bioc\meat\oneChannelGUI.Rcheck\00_pkg_src\oneChannelGUI\chm\oneChannelGUI.chm, 41,904 bytes
Compression decreased file by 41,177 bytes.
  preparing package oneChannelGUI for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: affylmGUI
Loading required package: limma
Loading required package: tcltk
Loading Tcl/Tk interface ... done
Loading required package: affy
Loading required package: affyio
Loading required package: tkWidgets
Loading required package: widgetTools
Loading required package: DynDoc
  adding MD5 sums

* DONE (oneChannelGUI)