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globaltest

4.7.1

Jelle Goeman
Last Changed Date: 2007-05-14 06:37:26 -0700
Last Changed Rev: 24637
lamb1 Linux (SUSE 10.1) x86_64  ERROR skipped
wellington Linux (SUSE 9.2) i686  ERROR skipped
churchill Solaris 2.9 sparc  ERROR skipped
lemming Windows Server 2003 (32-bit) x64 [ ERROR ]skippedskipped
Package: globaltest
Version: 4.7.1
Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD build globaltest
RetCode: 1
Time: 25.8 seconds
Status: ERROR
PackageFile: None

Command output

* checking for file 'globaltest/DESCRIPTION' ... OK
* preparing 'globaltest':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
installing R.css in D:/biocbld/bbs-2.1-bioc/tmpdir/Rinst55668878


---------- Making package globaltest ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'globaltest'
     Formats: text html latex example chm 
  GOstructure                       text    html    latex           chm
  annotation.vandeVijver            text    html    latex           chm
  checkerboard                      text    html    latex   example chm
  geneplot                          text    html    latex   example chm
  globaltest                        text    html    latex   example chm
  gostructure.vandeVijver           text    html    latex           chm
  gt.barplot-class                  text    html    latex           chm
  gt.result-class                   text    html    latex           chm
  gtGO                              text    html    latex   example chm
  mlogit                            text    html    latex   example chm
  multtest                          text    html    latex   example chm
  permutations                      text    html    latex   example chm
  regressionplot                    text    html    latex   example chm
  sampleplot                        text    html    latex   example chm
  sampling                          text    html    latex   example chm
  vandeVijver                       text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\bbs-2.1-bioc\meat\globaltest\chm\globaltest.chm





Compile time: 0 minutes, 0 seconds

17	Topics

162	Local links

0	Internet links

1	Graphic





Created d:\biocbld\bbs-2.1-bioc\meat\globaltest\chm\globaltest.chm, 48,301 bytes

Compression decreased file by 45,519 bytes.

  preparing package globaltest for lazy loading
Loading required package: multtest
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: survival
Loading required package: splines
Error in importIntoEnv(impenv, impnames, ns, impvars) : 
	objects 'Secondary', 'Term' are not exported by 'namespace:annotate'
Execution halted
make: *** [lazyload] Error 1
*** Installation of globaltest failed ***

Removing 'D:/biocbld/bbs-2.1-bioc/tmpdir/Rinst55668878/globaltest'
 ERROR
Installation failed.
Removing 'D:/biocbld/bbs-2.1-bioc/tmpdir/Rinst55668878'