Package: timecourse

Version: 1.7.0

Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD build timecourse

RetCode: 1

Time: 53.5 seconds

Status: ERROR

PackageFile: None

* checking for file 'timecourse/DESCRIPTION' ... OK
* preparing 'timecourse':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
installing R.css in D:/biocbld/bbs-2.1-bioc/tmpdir/Rinst198058032


---------- Making package timecourse ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'timecourse'
     Formats: text html latex example chm 
  abs2ratio                         text    html    latex           chm
  fruitfly                          text    html    latex           chm
  marrayTC-class                    text    html    latex           chm
  matrix.cov                        text    html    latex           chm
  mb.MANOVA                         text    html    latex   example chm
  mb.long                           text    html    latex   example chm
  ot.helmert                        text    html    latex           chm
  plotProfile                       text    html    latex           chm
  univ.func                         text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\bbs-2.1-bioc\meat\timecourse\chm\timecourse.chm





Compile time: 0 minutes, 0 seconds

10	Topics

27	Local links

2	Internet links

1	Graphic





Created d:\biocbld\bbs-2.1-bioc\meat\timecourse\chm\timecourse.chm, 34,967 bytes

Compression decreased file by 16,329 bytes.

  preparing package timecourse for lazy loading
Loading required package: limma
Loading required package: MASS
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

  adding MD5 sums

* DONE (timecourse)
* creating vignettes ... ERROR
Loading required package: limma
Loading required package: MASS
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.


Error: processing vignette 'timecourse.Rnw' failed with diagnostics:
 chunk 14 
Error in rep.pch[j, 2] <- rep.pch[as.numeric(con[, 1]) == as.numeric(both[i]),  : 
	number of items to replace is not a multiple of replacement length
In addition: Warning message:
NAs introduced by coercion 
Execution halted