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timecourse

1.7.0

Yu Chuan Tai
Last Changed Date: 2007-01-09 17:06:56 -0800
Last Changed Rev: 21912
lamb1 Linux (SUSE 10.1) x86_64 [ ERROR ]skipped
wellington Linux (SUSE 9.2) i686  ERROR skipped
churchill Solaris 2.9 sparc  ERROR skipped
lemming Windows Server 2003 (32-bit) x64  ERROR skippedskipped
Package: timecourse
Version: 1.7.0
Command: /home/biocbuild/bbs-2.1-bioc/R/bin/R CMD build timecourse
RetCode: 1
Time: 20.5 seconds
Status: ERROR
PackageFile: None

Command output

* checking for file 'timecourse/DESCRIPTION' ... OK
* preparing 'timecourse':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'timecourse' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: limma
Loading required package: MASS
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

** help
 >>> Building/Updating help pages for package 'timecourse'
     Formats: text html latex example 
  abs2ratio                         text    html    latex
  fruitfly                          text    html    latex
  marrayTC-class                    text    html    latex
  matrix.cov                        text    html    latex
  mb.MANOVA                         text    html    latex   example
  mb.long                           text    html    latex   example
  ot.helmert                        text    html    latex
  plotProfile                       text    html    latex
  univ.func                         text    html    latex
** building package indices ...
* DONE (timecourse)
* creating vignettes ... ERROR
Loading required package: limma
Loading required package: MASS
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.


Error: processing vignette 'timecourse.Rnw' failed with diagnostics:
 chunk 14 
Error in rep.pch[j, 2] <- rep.pch[as.numeric(con[, 1]) == as.numeric(both[i]),  : 
	number of items to replace is not a multiple of replacement length
In addition: Warning message:
NAs introduced by coercion 
Execution halted