Package: flowCore

Version: 1.0.2

Command: D:\biocbld\bbs-2.0-bioc\R\bin\R.exe CMD check flowCore_1.0.2.tar.gz

RetCode: 0

Time: 167.5 seconds

Status: OK

CheckDir: flowCore.Rcheck

Warnings: 0

* checking for working latex ... OK
* using log directory 'D:/biocbld/bbs-2.0-bioc/meat/flowCore.Rcheck'
* using R version 2.5.1 (2007-06-27)
* checking for file 'flowCore/DESCRIPTION' ... OK
* this is package 'flowCore' version '1.0.2'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'flowCore' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking for CRLF line endings in C/C++/Fortran sources/headers ... OK
* checking for portable use of $BLAS_LIBS ... OK
* creating flowCore-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating flowCore-manual.tex ... OK
* checking flowCore-manual.tex ... OK

installing R.css in D:/biocbld/bbs-2.0-bioc/meat/flowCore.Rcheck


---------- Making package flowCore ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  making DLL ...
making biexponential.d from biexponential.c
making inPolygon.d from inPolygon.c
gcc   -Id:/biocbld/bbs-2.0-bioc/R/include  -Wall -O3 -std=gnu99   -c biexponential.c -o biexponential.o
gcc   -Id:/biocbld/bbs-2.0-bioc/R/include  -Wall -O3 -std=gnu99   -c inPolygon.c -o inPolygon.o
windres -I d:/biocbld/bbs-2.0-bioc/R/include  -i flowCore_res.rc -o flowCore_res.o
gcc  -shared -s  -o flowCore.dll flowCore.def biexponential.o inPolygon.o flowCore_res.o  -Ld:/biocbld/bbs-2.0-bioc/R/bin    -lR
  ... DLL made
  installing DLL
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'flowCore'
     Formats: text html latex example chm 
  GvHD                              text    html    latex           chm
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Microsoft HTML Help Compiler 4.74.8702

Compiling d:\biocbld\bbs-2.0-bioc\meat\flowCore.Rcheck\00_pkg_src\flowCore\chm\flowCore.chm


Compile time: 0 minutes, 0 seconds
46	Topics
391	Local links
2	Internet links
1	Graphic


Created d:\biocbld\bbs-2.0-bioc\meat\flowCore.Rcheck\00_pkg_src\flowCore\chm\flowCore.chm, 72,851 bytes
Compression decreased file by 135,971 bytes.
  preparing package flowCore for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: rrcov
KernSmooth 2.22 installed
Copyright M. P. Wand 1997
Creating a new generic function for "colnames" in "flowCore"
Creating a new generic function for "colnames<-" in "flowCore"
Creating a new generic function for "nrow" in "flowCore"
Creating a new generic function for "ncol" in "flowCore"
  adding MD5 sums

* DONE (flowCore)