Back to the "Multiple platform build/check report"

Package 185/205OSArchBUILDCHECKBUILD BIN

SNPscan

0.1.17

Robert Scharpf		Linux (SUSE 9.2) x86_64 OK  ERROR 
Linux (SUSE 9.2) i686 OK  ERROR 
Solaris 2.9 sparc OK  ERROR 
Linux (SUSE 10.0) x86_64 OK  ERROR 
Windows Server 2003 x86_64 OK [ ERROR ] ERROR 
Windows XP i686 OK  ERROR skipped
Mac OS X (10.4.6) i686 OK  ERROR 
Package: SNPscan
Version: 0.1.17
Command: D:\biocbld\1.9d\R\bin\R.exe CMD check SNPscan_0.1.17.tar.gz
RetCode: 1
Time: 8.5 seconds
Status: ERROR
CheckDir: SNPscan.Rcheck
Warnings: NA

Command output

* checking for working latex ... OK
* using log directory 'D:/biocbld/1.9d/Rpacks/SNPscan.Rcheck'
* using R version 2.4.0 alpha (2006-09-10 r39242)
* checking for file 'SNPscan/DESCRIPTION' ... OK
* this is package 'SNPscan' version '0.1.17'
* checking package dependencies ... WARNING
package 'methods' is used but not declared
See the information on DESCRIPTION files in the chapter 'Creating R
packages' of the 'Writing R Extensions' manual.
* checking if this is a source package ... OK
* checking whether package 'SNPscan' can be installed ... ERROR
Installation failed.
See 'D:/biocbld/1.9d/Rpacks/SNPscan.Rcheck/00install.out' for details.

SNPscan.Rcheck/00install.out:

installing R.css in D:/biocbld/1.9d/Rpacks/SNPscan.Rcheck


---------- Making package SNPscan ------------
  adding build stamp to DESCRIPTION
  installing R files
Error in tools:::.install_package_code_files(".", "D:/biocbld/1.9d/Rpacks/SNPscan.Rcheck/SNPscan") : 
	
files in 'Collate' field missing from 'D:/biocbld/1.9d/Rpacks/SNPscan.Rcheck/00_pkg_src/SNPscan/R':
  methods-SnpTargetSet.R
  offset.R
  merge.R
  internals.R
  plotPair.R
  plotSample.R
  subset.R
  summary.R
  plot.R
  smoothSNP.R
  methods-SnpSummarySet.R
Execution halted
make[2]: *** [D:/biocbld/1.9d/Rpacks/SNPscan.Rcheck/SNPscan/R/SNPscan] Error 1
make[1]: *** [all] Error 2
make: *** [pkg-SNPscan] Error 2
*** Installation of SNPscan failed ***

Removing 'D:/biocbld/1.9d/Rpacks/SNPscan.Rcheck/SNPscan'