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| Package 35/205 | OS | Arch | BUILD | CHECK | BUILD BIN |
bridge1.5.0Raphael Gottardo | Linux (SUSE 9.2) | x86_64 | OK | OK | |
| Linux (SUSE 9.2) | i686 | OK | OK | ||
| Solaris 2.9 | sparc | OK | [ OK ] | ||
| Linux (SUSE 10.0) | x86_64 | OK | OK | ||
| Windows Server 2003 | x86_64 | OK | OK | OK | |
| Windows XP | i686 | OK | OK | skipped | |
| Mac OS X (10.4.6) | i686 | OK | OK |
| Package: bridge |
| Version: 1.5.0 |
| Command: /loc/biocbuild/1.9d/R/bin/R CMD check bridge_1.5.0.tar.gz |
| RetCode: 0 |
| Time: 214.0 seconds |
| Status: OK |
| CheckDir: bridge.Rcheck |
| Warnings: 0 |
* checking for working latex ... OK * using log directory '/loc/biocbuild/1.9d/Rpacks/bridge.Rcheck' * using R version 2.4.0 Under development (unstable) (2006-07-18 r38641) * checking for file 'bridge/DESCRIPTION' ... OK * this is package 'bridge' version '1.5.0' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'bridge' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for syntax errors ... OK * checking R files for non-ASCII characters ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking for CRLF line endings in C/C++/Fortran sources/headers ... OK * creating bridge-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating bridge-manual.tex ... OK * checking bridge-manual.tex ... OK
bridge.Rcheck/00install.out:
* Installing *source* package 'bridge' ...
** libs
gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -fPIC -g -O2 -std=gnu99 -c bridge2.affy.c -o bridge2.affy.o
bridge2.affy.c: In function 'up_date_w2':
bridge2.affy.c:300: warning: implicit declaration of function 'dirichlet'
gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -fPIC -g -O2 -std=gnu99 -c bridge2.c -o bridge2.o
gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -fPIC -g -O2 -std=gnu99 -c bridge2_util.c -o bridge2_util.o
bridge2_util.c: In function 'qr_solve':
bridge2_util.c:570: warning: implicit declaration of function 'dqrdc2_'
bridge2_util.c:585: warning: implicit declaration of function 'dqrcf_'
gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -fPIC -g -O2 -std=gnu99 -c bridge3.c -o bridge3.o
gcc -G -L/usr/local/lib -o bridge.so bridge2.affy.o bridge2.o bridge2_util.o bridge3.o
** R
** data
** inst
** help
>>> Building/Updating help pages for package 'bridge'
Formats: text html latex example
bridge.2samples text html latex example
bridge.3samples text html latex example
hiv text html latex
** building package indices ...
* DONE (bridge)