intansv
This is the development version of intansv; for the stable release version, see intansv.
Integrative analysis of structural variations
Bioconductor version: Development (3.23)
This package provides efficient tools to read and integrate structural variations predicted by popular softwares. Annotation and visulation of structural variations are also implemented in the package.
Author: Wen Yao <ywhzau at gmail.com>
Maintainer: Wen Yao <ywhzau at gmail.com>
Citation (from within R, enter
citation("intansv")):
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("intansv")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | Annotation, Genetics, Sequencing, Software |
| Version | 1.51.0 |
| In Bioconductor since | BioC 2.13 (R-3.0) (12 years) |
| License | MIT + file LICENSE |
| Depends | R (>= 2.14.0), plyr, ggbio, GenomicRanges |
| Imports | BiocGenerics, IRanges |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
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| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/intansv |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/intansv |
| Package Short Url | https://bioconductor.org/packages/intansv/ |
| Package Downloads Report | Download Stats |