brainImageRdata
This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see brainImageRdata.
Image masks and expression data for use with BrainImageR
Bioconductor version: 3.9
brainImageRdata contains image masks for the developing human and the adult human brain. These masks can be used in conjunction with the gene expression data to generate spatial gene set enrichment plots. It also contains the expression data for the 15 pcw human brain, the adult human brain, and the developing human brain.
Author: Sara Linker
Maintainer: Sara Linker <slinker at salk.edu>
citation("brainImageRdata")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("brainImageRdata")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("brainImageRdata")| brainImageRdata | HTML | R Script |
| Reference Manual |
Details
| biocViews | ExperimentData, ExpressionData, Homo_sapiens_Data, OrganismData |
| Version | 1.2.0 |
| License | CC BY-SA 4.0 |
| Depends | ExperimentHub |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | knitr |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | brainImageRdata_1.2.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/brainImageRdata |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/brainImageRdata |
| Package Short Url | https://bioconductor.org/packages/brainImageRdata/ |
| Package Downloads Report | Download Stats |