flowViz
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see flowViz.
Visualization for flow cytometry
Bioconductor version: 3.9
Provides visualization tools for flow cytometry data.
Author: B. Ellis, R. Gentleman, F. Hahne, N. Le Meur, D. Sarkar, M. Jiang
Maintainer: Mike Jiang <wjiang2 at fhcrc.org>
Citation (from within R, enter
citation("flowViz")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("flowViz")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("flowViz")| Visualizing Gates with Flow Cytometry Data | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | CellBasedAssays, FlowCytometry, ImmunoOncology, Infrastructure, Software, Visualization |
| Version | 1.48.0 |
| In Bioconductor since | BioC 2.0 (R-2.5) (17 years) |
| License | Artistic-2.0 |
| Depends | R (>= 2.7.0), flowCore(>= 1.41.9), lattice |
| Imports | stats4, Biobase, flowCore, graphics, grDevices, grid, KernSmooth, lattice, latticeExtra, MASS, methods, RColorBrewer, stats, utils, hexbin, IDPmisc |
| System Requirements | |
| URL |
See More
| Suggests | colorspace, flowStats, knitr |
| Linking To | |
| Enhances | |
| Depends On Me | flowFP, flowQ, flowTrans, flowVS, highthroughputassays, plateCore, QUALIFIER |
| Imports Me | flowClust, flowFit, flowQ, flowStats, flowTrans, flowWorkspace, ncdfFlow, openCyto, QUALIFIER |
| Suggests Me | flowBeads, flowClean, flowCore, flowTime, ggcyto |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | flowViz_1.48.0.tar.gz |
| Windows Binary | flowViz_1.48.0.zip |
| Mac OS X 10.11 (El Capitan) | flowViz_1.48.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/flowViz |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/flowViz |
| Bioc Package Browser | https://code.bioconductor.org/browse/flowViz/ |
| Package Short Url | https://bioconductor.org/packages/flowViz/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |