flowVS
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see flowVS.
Variance stabilization in flow cytometry (and microarrays)
Bioconductor version: 3.9
Per-channel variance stabilization from a collection of flow cytometry samples by Bertlett test for homogeneity of variances. The approach is applicable to microarrays data as well.
Author: Ariful Azad
Maintainer: Ariful Azad <azadcse at gmail.com>
Citation (from within R, enter
citation("flowVS")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("flowVS")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("flowVS")| flowVS: Cell population matching and meta-clustering in Flow Cytometry | R Script | |
| Reference Manual |
Details
| biocViews | CellBasedAssays, FlowCytometry, ImmunoOncology, Microarray, Software |
| Version | 1.16.0 |
| In Bioconductor since | BioC 3.1 (R-3.2) (9 years) |
| License | Artistic-2.0 |
| Depends | R (>= 3.2), methods, flowCore, flowViz, flowStats |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | knitr, vsn |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | flowVS_1.16.0.tar.gz |
| Windows Binary | flowVS_1.16.0.zip (32- & 64-bit) |
| Mac OS X 10.11 (El Capitan) | flowVS_1.16.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/flowVS |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/flowVS |
| Bioc Package Browser | https://code.bioconductor.org/browse/flowVS/ |
| Package Short Url | https://bioconductor.org/packages/flowVS/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |