flowQ
This package is for version 3.7 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see flowQBData.
Quality control for flow cytometry
Bioconductor version: 3.7
Provides quality control and quality assessment tools for flow cytometry data.
Author: R. Gentleman, F. Hahne, J. Kettman, N. Le Meur, N. Gopalakrishnan
Maintainer: Mike Jiang <wjiang2 at fhcrc.org>
Citation (from within R, enter
citation("flowQ")):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("flowQ")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("flowQ")| Basic Functions for Flow Cytometry Data | R Script | |
| Data Quality Assesment for Ungated Flow Cytometry Data | R Script | |
| Reference Manual |
Details
| biocViews | CellBasedAssays, FlowCytometry, Infrastructure, Software |
| Version | 1.40.0 |
| In Bioconductor since | BioC 2.2 (R-2.7) (16 years) |
| License | Artistic-2.0 |
| Depends | R (>= 2.10.0), methods, BiocGenerics, outliers, lattice, flowViz, mvoutlier, bioDist, parody, RColorBrewer, latticeExtra |
| Imports | methods, BiocGenerics, geneplotter, flowCore, flowViz, IRanges |
| System Requirements | ImageMagick |
| URL |
See More
| Suggests | flowStats |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | flowQ_1.40.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/flowQ |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/flowQ |
| Package Short Url | https://bioconductor.org/packages/flowQ/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.7 | Source Archive |