| Package | Maintainer | Title |
|---|---|---|
| betr | Martin Aryee | Identify differentially expressed genes in microarray time-course data |
| cycle | Matthias Futschik | Significance of periodic expression pattern in time-series data |
| limma | Gordon Smyth | Linear Models for Microarray Data |
| LiquidAssociation | Yen-Yi Ho | LiquidAssociation |
| maSigPro | Ana Conesa | Significant Gene Expression Profile Differences in Time Course Microarray Data |
| Mfuzz | Matthias Futschik | Soft clustering of time series gene expression data |
| RmiR | Francesco Favero | Package to work with miRNAs and miRNA targets with R |
| RTCA | Jitao David Zhang | Open-source toolkit to analyse data from xCELLigence System (RTCA) by Roche |
| TDARACNE | Zoppoli Pietro | Network reverse engineering from time course data. |
| tigre | Antti Honkela | Transcription factor Inference through Gaussian process Reconstruction of Expression |
| timecourse | Yu Chuan Tai | Statistical Analysis for Developmental Microarray Time Course Data |