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AgiMicroRna
Processing and Differential Expression Analysis of Agilent microRNA chips
Bioconductor version: 2.7
Processing and Analysis of Agilent microRNA data
Author: Pedro Lopez-Romero <plopez at cnic.es>
Maintainer: Pedro Lopez-Romero <plopez at cnic.es>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("AgiMicroRna")
To cite this package in a publication, start R and enter:
citation("AgiMicroRna")
Documentation
| R Script | AgiMicroRna | |
| Reference Manual |
Details
| biocViews | Microarray, AgilentChip, OneChannel, Preprocessing, DifferentialExpression |
| Depends | R (>= 2.9.0), Biobase, limma, affy(>= 1.22), preprocessCore |
| Imports | Biobase |
| Suggests | affycoretools, geneplotter, marray, gplots, gtools, gdata, codelink |
| System Requirements | |
| License | GPL-3 |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Version | 1.4.0 |
| Since | Bioconductor 2.5 (R-2.10) |
Package Downloads
| Package Source | AgiMicroRna_1.4.0.tar.gz |
| Windows Binary | AgiMicroRna_1.4.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | AgiMicroRna_1.4.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
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