Back to Workflows build report for BioC 3.22

This page was generated on 2026-04-07 16:30 -0400 (Tue, 07 Apr 2026).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.3 LTS)x86_644.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 4897
merida1macOS 12.7.6 Montereyx86_644.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 4690
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 15/29HostnameOS / ArchINSTALLBUILD
liftOver 1.34.0  (landing page)
Bioconductor Package Maintainer
Snapshot Date: 2026-04-07 12:45 -0400 (Tue, 07 Apr 2026)
git_url: https://git.bioconductor.org/packages/liftOver
git_branch: RELEASE_3_22
git_last_commit: 5b55e44
git_last_commit_date: 2025-10-29 09:46:46 -0400 (Wed, 29 Oct 2025)
nebbiolo2Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.6 Monterey / x86_64  OK    ERROR  

BUILD results for liftOver on merida1

To the developers/maintainers of the liftOver package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: liftOver
Version: 1.34.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data liftOver
StartedAt: 2026-04-07 13:06:56 -0400 (Tue, 07 Apr 2026)
EndedAt: 2026-04-07 13:07:03 -0400 (Tue, 07 Apr 2026)
EllapsedTime: 6.6 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data liftOver
###
##############################################################################
##############################################################################


* checking for file ‘liftOver/DESCRIPTION’ ... OK
* preparing ‘liftOver’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘liftOver’ ...
** this is package ‘liftOver’ version ‘1.34.0’
** using staged installation
** data
*** moving datasets to lazyload DB
Error in lazyLoadDBinsertVariable(vars[i], from, datafile, ascii, compress,  : 
  write failed
ERROR: lazydata failed for package ‘liftOver’
* removing ‘/private/tmp/RtmpJ5izQy/Rinstf532ff9870c/liftOver’
      -----------------------------------
ERROR: package installation failed