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This page was generated on 2024-12-19 15:42 -0500 (Thu, 19 Dec 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.1 LTS)x86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4743
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 418/431HostnameOS / ArchINSTALLBUILDCHECK
VariantToolsData 1.30.0  (landing page)
Michael Lawrence
Snapshot Date: 2024-12-19 07:30 -0500 (Thu, 19 Dec 2024)
git_url: https://git.bioconductor.org/packages/VariantToolsData
git_branch: RELEASE_3_20
git_last_commit: c6c4773
git_last_commit_date: 2024-10-29 09:46:45 -0500 (Tue, 29 Oct 2024)
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published

BUILD results for VariantToolsData on nebbiolo2

To the developers/maintainers of the VariantToolsData package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: VariantToolsData
Version: 1.30.0
Command: /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data VariantToolsData
StartedAt: 2024-12-19 11:40:33 -0500 (Thu, 19 Dec 2024)
EndedAt: 2024-12-19 11:41:25 -0500 (Thu, 19 Dec 2024)
EllapsedTime: 51.7 seconds
RetCode: 0
Status:   OK  
PackageFile: VariantToolsData_1.30.0.tar.gz
PackageFileSize: 200.7 MiB

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data VariantToolsData
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* checking for file ‘VariantToolsData/DESCRIPTION’ ... OK
* preparing ‘VariantToolsData’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* looking to see if a ‘data/datalist’ file should be added
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in
  serialize/load version 3 cannot be read in older versions of R.
  File(s) containing such objects:
    ‘VariantToolsData/data/geno.rda’ ‘VariantToolsData/data/repeats.rda’
    ‘VariantToolsData/data/tallies.rda’
* building ‘VariantToolsData_1.30.0.tar.gz’