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This page was generated on 2025-01-10 15:29 -0500 (Fri, 10 Jan 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2024-12-18 r87448) -- "Unsuffered Consequences" 863
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Package 49/216HostnameOS / ArchINSTALLBUILDCHECK
ChemmineR 3.59.0  (landing page)
Thomas Girke
Snapshot Date: 2025-01-10 12:00 -0500 (Fri, 10 Jan 2025)
git_url: https://git.bioconductor.org/packages/ChemmineR
git_branch: devel
git_last_commit: ee3bf9e
git_last_commit_date: 2024-10-29 09:30:11 -0500 (Tue, 29 Oct 2024)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    ERROR  skipped

BUILD results for ChemmineR on teran2

To the developers/maintainers of the ChemmineR package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: ChemmineR
Version: 3.59.0
Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data ChemmineR
StartedAt: 2025-01-10 12:35:53 -0500 (Fri, 10 Jan 2025)
EndedAt: 2025-01-10 12:37:05 -0500 (Fri, 10 Jan 2025)
EllapsedTime: 72.2 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data ChemmineR
###
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* checking for file ‘ChemmineR/DESCRIPTION’ ... OK
* preparing ‘ChemmineR’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘ChemmineR.Rmd’ using rmarkdown

Quitting from lines 538-539 [unnamed-chunk-39] (ChemmineR.Rmd)
Error: processing vignette 'ChemmineR.Rmd' failed with diagnostics:
cannot open the connection to 'https://cluster.hpcc.ucr.edu/~tgirke/Documents/R_BioCond/Samples/v3000.sdf'
--- failed re-building ‘ChemmineR.Rmd’

SUMMARY: processing the following file failed:
  ‘ChemmineR.Rmd’

Error: Vignette re-building failed.
Execution halted