Back to Long Tests report for BioC 3.21

This page was generated on 2025-08-09 23:55 -0400 (Sat, 09 Aug 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.2 LTS)x86_644.5.1 (2025-06-13) -- "Great Square Root" 4823
palomino7Windows Server 2022 Datacenterx644.5.1 (2025-06-13 ucrt) -- "Great Square Root" 4565
merida1macOS 12.7.5 Montereyx86_644.5.1 RC (2025-06-05 r88288) -- "Great Square Root" 4603
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 11/30HostnameOS / ArchCHECK
cBioPortalData 2.20.0  (landing page)
Marcel Ramos
Snapshot Date: 2025-08-09 09:55 -0400 (Sat, 09 Aug 2025)
git_url: https://git.bioconductor.org/packages/cBioPortalData
git_branch: RELEASE_3_21
git_last_commit: e2964c0
git_last_commit_date: 2025-04-15 11:58:59 -0400 (Tue, 15 Apr 2025)
nebbiolo1Linux (Ubuntu 24.04.2 LTS) / x86_64  ERROR  
palomino7Windows Server 2022 Datacenter / x64  ERROR  
merida1macOS 12.7.5 Monterey / x86_64  ERROR  

CHECK results for cBioPortalData on palomino7

To the developers/maintainers of the cBioPortalData package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: cBioPortalData
Version: 2.20.0
Command: E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD check --no-multiarch --test-dir=longtests --no-stop-on-test-error --no-codoc --no-examples --no-manual --ignore-vignettes --check-subdirs=no cBioPortalData_2.20.0.tar.gz
StartedAt: 2025-08-09 16:06:34 -0400 (Sat, 09 Aug 2025)
EndedAt: 2025-08-09 16:29:33 -0400 (Sat, 09 Aug 2025)
EllapsedTime: 1379.3 seconds
RetCode: 1
Status:   ERROR  
CheckDir: cBioPortalData.Rcheck
Warnings: NA

Tests output

cBioPortalData.Rcheck/tests/testthat.Rout.fail


R version 4.5.1 (2025-06-13 ucrt) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(cBioPortalData)
Loading required package: AnVIL
Loading required package: dplyr

Attaching package: 'dplyr'

The following object is masked from 'package:testthat':

    matches

The following objects are masked from 'package:stats':

    filter, lag

The following objects are masked from 'package:base':

    intersect, setdiff, setequal, union

Loading required package: AnVILBase
Loading required package: MultiAssayExperiment
Loading required package: SummarizedExperiment
Loading required package: MatrixGenerics
Loading required package: matrixStats

Attaching package: 'matrixStats'

The following object is masked from 'package:dplyr':

    count


Attaching package: 'MatrixGenerics'

The following objects are masked from 'package:matrixStats':

    colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse,
    colCounts, colCummaxs, colCummins, colCumprods, colCumsums,
    colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs,
    colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats,
    colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds,
    colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads,
    colWeightedMeans, colWeightedMedians, colWeightedSds,
    colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet,
    rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods,
    rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps,
    rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins,
    rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks,
    rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars,
    rowWeightedMads, rowWeightedMeans, rowWeightedMedians,
    rowWeightedSds, rowWeightedVars

Loading required package: GenomicRanges
Loading required package: stats4
Loading required package: BiocGenerics
Loading required package: generics

Attaching package: 'generics'

The following object is masked from 'package:dplyr':

    explain

The following objects are masked from 'package:base':

    as.difftime, as.factor, as.ordered, intersect, is.element, setdiff,
    setequal, union


Attaching package: 'BiocGenerics'

The following object is masked from 'package:dplyr':

    combine

The following objects are masked from 'package:stats':

    IQR, mad, sd, var, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append,
    as.data.frame, basename, cbind, colnames, dirname, do.call,
    duplicated, eval, evalq, get, grep, grepl, is.unsorted, lapply,
    mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int,
    rank, rbind, rownames, sapply, saveRDS, table, tapply, unique,
    unsplit, which.max, which.min

Loading required package: S4Vectors

Attaching package: 'S4Vectors'

The following objects are masked from 'package:dplyr':

    first, rename

The following object is masked from 'package:utils':

    findMatches

The following objects are masked from 'package:base':

    I, expand.grid, unname

Loading required package: IRanges

Attaching package: 'IRanges'

The following objects are masked from 'package:dplyr':

    collapse, desc, slice

The following object is masked from 'package:grDevices':

    windows

Loading required package: GenomeInfoDb
Loading required package: Biobase
Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.


Attaching package: 'Biobase'

The following object is masked from 'package:MatrixGenerics':

    rowMedians

The following objects are masked from 'package:matrixStats':

    anyMissing, rowMedians

> 
> test_check("cBioPortalData")
Error in utils::download.file(fileURL, destfile = tmpFile, quiet = TRUE,  : 
  'wget' call had nonzero exit status
Error in utils::download.file(fileURL, destfile = tmpFile, quiet = TRUE,  : 
  'wget' call had nonzero exit status
Error in utils::download.file(fileURL, destfile = tmpFile, quiet = TRUE,  : 
  'wget' call had nonzero exit status
Error in utils::download.file(fileURL, destfile = tmpFile, quiet = TRUE,  : 
  'wget' call had nonzero exit status
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
Error in .checkFixSampleMap(sampleMap) : 
  'sampleMap' does not have required columns
[ FAIL 2 | WARN 5 | SKIP 0 | PASS 6 ]

══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_cBioDataPack.R:14:9'): cBioDataPack works on at least 80% of studies ──
Error: database or disk is full
Backtrace:
     ▆
  1. └─cBioPortalData::removePackCache(cancer_study_id = stud, dry.run = FALSE) at test_cBioDataPack.R:14:9
  2.   ├─BiocFileCache::bfcremove(bfc, rid)
  3.   └─BiocFileCache::bfcremove(bfc, rid)
  4.     └─BiocFileCache:::.sql_remove_resource(x, rids)
  5.       └─BiocFileCache:::.sql_db_execute(bfc, cmd)
  6.         ├─DBI::dbExecute(con, sql, params = param)
  7.         └─DBI::dbExecute(con, sql, params = param)
  8.           ├─DBI::dbSendStatement(conn, statement, ...)
  9.           └─DBI::dbSendStatement(conn, statement, ...)
 10.             ├─DBI::dbSendQuery(conn, statement, ...)
 11.             └─RSQLite::dbSendQuery(conn, statement, ...)
 12.               └─RSQLite (local) .local(conn, statement, ...)
 13.                 ├─methods::new(...)
 14.                 │ ├─methods::initialize(value, ...)
 15.                 │ └─methods::initialize(value, ...)
 16.                 └─RSQLite:::result_create(conn@ptr, statement)
── Failure ('test_cBioPortalData.R:23:5'): cBioPortal API is working with most studies ──
successrate > 80 is not TRUE

`actual`:   FALSE
`expected`: TRUE 

[ FAIL 2 | WARN 5 | SKIP 0 | PASS 6 ]
Error: Test failures
Execution halted

'R CMD check' output

##############################################################################
##############################################################################
###
### Running command:
###
###   E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD check --no-multiarch --test-dir=longtests --no-stop-on-test-error --no-codoc --no-examples --no-manual --ignore-vignettes --check-subdirs=no cBioPortalData_2.20.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory 'E:/biocbuild/bbs-3.21-bioc-longtests/meat/cBioPortalData.Rcheck'
* using R version 4.5.1 (2025-06-13 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.2.0
    GNU Fortran (GCC) 14.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* using options '--no-codoc --no-examples --no-manual --ignore-vignettes --no-stop-on-test-error'
* checking for file 'cBioPortalData/DESCRIPTION' ... OK
* this is package 'cBioPortalData' version '2.20.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'cBioPortalData' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
.portalExperiments: no visible binding for global variable
  'molecularAlterationType'
.portalExperiments: no visible binding for global variable 'datatype'
fetchData: no visible binding for global variable
  'molecularAlterationType'
fetchData: no visible binding for global variable 'datatype'
Undefined global functions or variables:
  datatype molecularAlterationType
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... SKIPPED
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in 'vignettes' ... SKIPPED
* checking examples ... SKIPPED
* checking for unstated dependencies in 'longtests' ... OK
* checking tests in 'longtests' ...
  Running 'testthat.R'
 ERROR
Running the tests in 'longtests/testthat.R' failed.
Last 13 lines of output:
   11.             └─RSQLite::dbSendQuery(conn, statement, ...)
   12.               └─RSQLite (local) .local(conn, statement, ...)
   13.                 ├─methods::new(...)
   14.                 │ ├─methods::initialize(value, ...)
   15.                 │ └─methods::initialize(value, ...)
   16.                 └─RSQLite:::result_create(conn@ptr, statement)
  ── Failure ('test_cBioPortalData.R:23:5'): cBioPortal API is working with most studies ──
  successrate > 80 is not TRUE
  
  `actual`:   FALSE
  `expected`: TRUE 
  
  [ FAIL 2 | WARN 5 | SKIP 0 | PASS 6 ]
  Error: Test failures
  Execution halted
* DONE

Status: 1 ERROR, 1 NOTE
See
  'E:/biocbuild/bbs-3.21-bioc-longtests/meat/cBioPortalData.Rcheck/00check.log'
for details.

Installation output

cBioPortalData.Rcheck/00install.out

* installing *source* package 'cBioPortalData' ...
** this is package 'cBioPortalData' version '2.20.0'
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (cBioPortalData)