Back to Long Tests report for BioC 3.22

This page was generated on 2026-02-07 23:55 -0500 (Sat, 07 Feb 2026).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.3 LTS)x86_644.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 4888
merida1macOS 12.7.6 Montereyx86_644.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 4678
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 17/31HostnameOS / ArchCHECK
DOtools 1.0.1  (landing page)
Mariano Ruz Jurado
Snapshot Date: 2026-02-07 09:55 -0500 (Sat, 07 Feb 2026)
git_url: https://git.bioconductor.org/packages/DOtools
git_branch: RELEASE_3_22
git_last_commit: 6ae06dc
git_last_commit_date: 2026-02-01 13:57:56 -0500 (Sun, 01 Feb 2026)
nebbiolo2Linux (Ubuntu 24.04.3 LTS) / x86_64  ERROR  
merida1macOS 12.7.6 Monterey / x86_64  ERROR  

CHECK results for DOtools on nebbiolo2

To the developers/maintainers of the DOtools package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: DOtools
Version: 1.0.1
Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --test-dir=longtests --no-stop-on-test-error --no-codoc --no-examples --no-manual --ignore-vignettes --check-subdirs=no DOtools_1.0.1.tar.gz
StartedAt: 2026-02-07 16:07:01 -0500 (Sat, 07 Feb 2026)
EndedAt: 2026-02-07 16:07:06 -0500 (Sat, 07 Feb 2026)
EllapsedTime: 5.0 seconds
RetCode: 1
Status:   ERROR  
CheckDir: DOtools.Rcheck
Warnings: NA

Tests output


'R CMD check' output

##############################################################################
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### Running command:
###
###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --test-dir=longtests --no-stop-on-test-error --no-codoc --no-examples --no-manual --ignore-vignettes --check-subdirs=no DOtools_1.0.1.tar.gz
###
##############################################################################
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* using log directory ‘/home/biocbuild/bbs-3.22-bioc-longtests/meat/DOtools.Rcheck’
* using R version 4.5.2 (2025-10-31)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
    GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* using options ‘--no-codoc --no-examples --no-manual --ignore-vignettes --no-stop-on-test-error’
* checking for file ‘DOtools/DESCRIPTION’ ... OK
* this is package ‘DOtools’ version ‘1.0.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Namespace dependency missing from DESCRIPTION Imports/Depends entries: ‘FNN’

Imports includes 35 non-default packages.
Importing from so many packages makes the package vulnerable to any of
them becoming unavailable.  Move as many as possible to Suggests and
use conditionally.

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE

Status: 1 ERROR
See
  ‘/home/biocbuild/bbs-3.22-bioc-longtests/meat/DOtools.Rcheck/00check.log’
for details.

Installation output