Back to Multiple platform build/check report for BioC 3.20: simplified long |
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This page was generated on 2024-11-20 12:07 -0500 (Wed, 20 Nov 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
teran2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.2 (2024-10-31) -- "Pile of Leaves" | 4481 |
nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.2 (2024-10-31) -- "Pile of Leaves" | 4479 |
palomino8 | Windows Server 2022 Datacenter | x64 | 4.4.2 (2024-10-31 ucrt) -- "Pile of Leaves" | 4359 |
lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4539 |
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4493 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 2260/2289 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
waddR 1.20.0 (landing page) Julian Flesch
| teran2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK | |||||||||
nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK | ||||||||||
palomino8 | Windows Server 2022 Datacenter / x64 | ERROR | ERROR | skipped | skipped | |||||||||
lconway | macOS 12.7.1 Monterey / x86_64 | OK | ERROR | skipped | skipped | |||||||||
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | OK | ||||||||||
To the developers/maintainers of the waddR package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/waddR.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: waddR |
Version: 1.20.0 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data waddR |
StartedAt: 2024-11-19 19:05:38 -0500 (Tue, 19 Nov 2024) |
EndedAt: 2024-11-19 19:06:49 -0500 (Tue, 19 Nov 2024) |
EllapsedTime: 71.7 seconds |
RetCode: 1 |
Status: ERROR |
PackageFile: None |
PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data waddR ### ############################################################################## ############################################################################## * checking for file ‘waddR/DESCRIPTION’ ... OK * preparing ‘waddR’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘waddR.Rmd’ using rmarkdown Warning: The vignette title specified in \VignetteIndexEntry{} is different from the title in the YAML metadata. The former is "waddR", and the latter is "The `waddR` package". If that is intentional, you may set options(rmarkdown.html_vignette.check_title = FALSE) to suppress this check. --- finished re-building ‘waddR.Rmd’ --- re-building ‘wasserstein_metric.Rmd’ using rmarkdown Warning: The vignette title specified in \VignetteIndexEntry{} is different from the title in the YAML metadata. The former is "wasserstein_metric", and the latter is "2-Wasserstein distance calculation". If that is intentional, you may set options(rmarkdown.html_vignette.check_title = FALSE) to suppress this check. --- finished re-building ‘wasserstein_metric.Rmd’ --- re-building ‘wasserstein_singlecell.Rmd’ using rmarkdown Quitting from lines 92-94 [unnamed-chunk-6] (wasserstein_singlecell.Rmd) Error: processing vignette 'wasserstein_singlecell.Rmd' failed with diagnostics: wrong args for environment subassignment --- failed re-building ‘wasserstein_singlecell.Rmd’ --- re-building ‘wasserstein_test.Rmd’ using rmarkdown Warning in file("", "w+b") : cannot open file '/tmp/RtmpsSLBdy/Rf1697050592cec': No such file or directory Quitting from lines 11-15 [unnamed-chunk-1] (wasserstein_test.Rmd) Error: processing vignette 'wasserstein_test.Rmd' failed with diagnostics: cannot open the connection --- failed re-building ‘wasserstein_test.Rmd’ SUMMARY: processing the following files failed: ‘wasserstein_singlecell.Rmd’ ‘wasserstein_test.Rmd’ Error: Vignette re-building failed. Execution halted