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This page was generated on 2025-01-09 12:10 -0500 (Thu, 09 Jan 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.1 LTS)x86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4744
palomino8Windows Server 2022 Datacenterx644.4.2 (2024-10-31 ucrt) -- "Pile of Leaves" 4487
merida1macOS 12.7.5 Montereyx86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4515
kjohnson1macOS 13.6.6 Venturaarm644.4.2 (2024-10-31) -- "Pile of Leaves" 4467
taishanLinux (openEuler 24.03 LTS)aarch644.4.2 (2024-10-31) -- "Pile of Leaves" 4358
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1878/2289HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
schex 1.20.0  (landing page)
Saskia Freytag
Snapshot Date: 2025-01-02 13:00 -0500 (Thu, 02 Jan 2025)
git_url: https://git.bioconductor.org/packages/schex
git_branch: RELEASE_3_20
git_last_commit: 5da0507
git_last_commit_date: 2024-10-29 10:41:09 -0500 (Tue, 29 Oct 2024)
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    ERROR  skippedskipped
kjohnson1macOS 13.6.6 Ventura / arm64  OK    ERROR  skippedskipped
taishanLinux (openEuler 24.03 LTS) / aarch64  ERROR    ERROR  skipped

BUILD results for schex on kjohnson1

To the developers/maintainers of the schex package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/schex.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: schex
Version: 1.20.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data schex
StartedAt: 2025-01-03 07:13:44 -0500 (Fri, 03 Jan 2025)
EndedAt: 2025-01-03 07:16:31 -0500 (Fri, 03 Jan 2025)
EllapsedTime: 167.4 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data schex
###
##############################################################################
##############################################################################


* checking for file ‘schex/DESCRIPTION’ ... OK
* preparing ‘schex’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘Seurat_to_SCE.Rmd’ using rmarkdown
2025-01-03 07:14:35.210 R[46794:115745281] XType: Using static font registry.
--- finished re-building ‘Seurat_to_SCE.Rmd’

--- re-building ‘using_schex.Rmd’ using rmarkdown

Quitting from lines 243-247 [unnamed-chunk-2] (using_schex.Rmd)
Error: processing vignette 'using_schex.Rmd' failed with diagnostics:
Problem while converting geom to grob.
ℹ Error occurred in the 2nd layer.
Caused by error in `locate_fonts_c()`:
! 'names' attribute [5797897776] must be the same length as the vector [3]
--- failed re-building ‘using_schex.Rmd’

SUMMARY: processing the following file failed:
  ‘using_schex.Rmd’

Error: Vignette re-building failed.
Execution halted