Back to Multiple platform build/check report for BioC 3.20:   simplified   long
ABCDEFGHIJKLMNOPQ[R]STUVWXYZ

This page was generated on 2024-06-11 15:41 -0400 (Tue, 11 Jun 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 RC (2024-04-16 r86468) -- "Puppy Cup" 4679
palomino4Windows Server 2022 Datacenterx644.4.0 RC (2024-04-16 r86468 ucrt) -- "Puppy Cup" 4414
merida1macOS 12.7.4 Montereyx86_644.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup" 4441
kjohnson1macOS 13.6.6 Venturaarm644.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup" 4394
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1764/2239HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
rqt 1.31.0  (landing page)
Ilya Y. Zhbannikov
Snapshot Date: 2024-06-09 14:00 -0400 (Sun, 09 Jun 2024)
git_url: https://git.bioconductor.org/packages/rqt
git_branch: devel
git_last_commit: 5002bfa
git_last_commit_date: 2024-04-30 10:56:39 -0400 (Tue, 30 Apr 2024)
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    ERROR  skipped
palomino4Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
merida1macOS 12.7.4 Monterey / x86_64  OK    ERROR  skippedskipped
kjohnson1macOS 13.6.6 Ventura / arm64  OK    ERROR  skippedskipped

BUILD results for rqt on palomino4

To the developers/maintainers of the rqt package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/rqt.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: rqt
Version: 1.31.0
Command: chmod a+r rqt -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data rqt
StartedAt: 2024-06-09 21:52:03 -0400 (Sun, 09 Jun 2024)
EndedAt: 2024-06-09 21:53:02 -0400 (Sun, 09 Jun 2024)
EllapsedTime: 59.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r rqt -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data rqt
###
##############################################################################
##############################################################################


* checking for file 'rqt/DESCRIPTION' ... OK
* preparing 'rqt':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'rqt-vignette.Rmd' using rmarkdown
Error: processing vignette 'rqt-vignette.Rmd' failed with diagnostics:
The closing fence on line 125 ("```") in rqt-vignette.Rmd does not match the opening fence "````" on line 113. You are recommended to fix either the opening or closing fence of the code chunk to use exactly the same numbers of backticks and same level of indentation (or blockquote). See https://yihui.org/en/2021/10/unbalanced-delimiters/ for more info.
Error: tangling vignette 'rqt-vignette.Rmd' failed with diagnostics:
The closing fence on line 125 ("```") in rqt-vignette.Rmd does not match the opening fence "````" on line 113. You are recommended to fix either the opening or closing fence of the code chunk to use exactly the same numbers of backticks and same level of indentation (or blockquote). See https://yihui.org/en/2021/10/unbalanced-delimiters/ for more info.
--- failed re-building 'rqt-vignette.Rmd'

SUMMARY: processing the following files failed:
  'rqt-vignette.Rmd' 'rqt-vignette.Rmd'

Error: Vignette re-building failed.
Execution halted