| Back to Multiple platform build/check report for BioC 3.20: simplified long |
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This page was generated on 2024-11-09 21:31 -0500 (Sat, 09 Nov 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| teran2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4505 |
| palomino8 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4506 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4538 |
| kjohnson3 | macOS 13.6.5 Ventura | arm64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4486 |
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4493 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1598/2289 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| profileScoreDist 1.34.0 (landing page) Paal O. Westermark
| teran2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| palomino8 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.6.5 Ventura / arm64 | OK | ERROR | skipped | skipped | |||||||||
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | OK | ||||||||||
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To the developers/maintainers of the profileScoreDist package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/profileScoreDist.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: profileScoreDist |
| Version: 1.34.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data profileScoreDist |
| StartedAt: 2024-11-08 18:37:56 -0500 (Fri, 08 Nov 2024) |
| EndedAt: 2024-11-08 18:38:04 -0500 (Fri, 08 Nov 2024) |
| EllapsedTime: 8.1 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data profileScoreDist
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* checking for file ‘profileScoreDist/DESCRIPTION’ ... OK
* preparing ‘profileScoreDist’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘profileScoreDist-vignette.Rmd’ using rmarkdown
! Undefined control sequence.
l.171 ... Rahmann, Müller, and Vingron (\citeproc
{ref-rahmann_power_2003}{2...
Error: processing vignette 'profileScoreDist-vignette.Rmd' failed with diagnostics:
LaTeX failed to compile /private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/Rtmpses0lF/Rbuild1334771fe8474/profileScoreDist/vignettes/profileScoreDist-vignette.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See profileScoreDist-vignette.log for more info.
--- failed re-building ‘profileScoreDist-vignette.Rmd’
SUMMARY: processing the following file failed:
‘profileScoreDist-vignette.Rmd’
Error: Vignette re-building failed.
Execution halted