Back to Multiple platform build/check report for BioC 3.20: simplified long |
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This page was generated on 2024-11-20 12:06 -0500 (Wed, 20 Nov 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
teran2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.2 (2024-10-31) -- "Pile of Leaves" | 4481 |
nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.2 (2024-10-31) -- "Pile of Leaves" | 4479 |
palomino8 | Windows Server 2022 Datacenter | x64 | 4.4.2 (2024-10-31 ucrt) -- "Pile of Leaves" | 4359 |
lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4539 |
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4493 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 1565/2289 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
plotgardener 1.12.0 (landing page) Nicole Kramer
| teran2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK | |||||||||
nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK | ||||||||||
palomino8 | Windows Server 2022 Datacenter / x64 | OK | OK | ERROR | OK | |||||||||
lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | |||||||||
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | OK | ||||||||||
To the developers/maintainers of the plotgardener package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/plotgardener.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: plotgardener |
Version: 1.12.0 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:plotgardener.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings plotgardener_1.12.0.tar.gz |
StartedAt: 2024-11-20 01:14:22 -0500 (Wed, 20 Nov 2024) |
EndedAt: 2024-11-20 01:26:38 -0500 (Wed, 20 Nov 2024) |
EllapsedTime: 735.4 seconds |
RetCode: 0 |
Status: OK |
CheckDir: plotgardener.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:plotgardener.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings plotgardener_1.12.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/Users/biocbuild/bbs-3.20-bioc/meat/plotgardener.Rcheck’ * using R version 4.4.1 (2024-06-14) * using platform: x86_64-apple-darwin20 * R was compiled by Apple clang version 14.0.0 (clang-1400.0.29.202) GNU Fortran (GCC) 12.2.0 * running under: macOS Monterey 12.7.6 * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘plotgardener/DESCRIPTION’ ... OK * this is package ‘plotgardener’ version ‘1.12.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ...Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib: cannot open URL 'https://CRAN.R-project.org/src/contrib/PACKAGES' OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘plotgardener’ can be installed ... OK * used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’ * used SDK: ‘MacOSX11.3.sdk’ * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE .checkCool: no visible binding for global variable ‘name’ pgParams: no visible binding for global variable ‘width’ pgParams: no visible binding for global variable ‘strand’ Undefined global functions or variables: name strand width * checking Rd files ... NOTE checkRd: (-1) annoDomains.Rd:28-29: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoDomains.Rd:30-31: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoDomains.Rd:32-33: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoDomains.Rd:34-35: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoGenomeLabel.Rd:47: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoGenomeLabel.Rd:48-49: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoGenomeLabel.Rd:50-51: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoGenomeLabel.Rd:69: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoGenomeLabel.Rd:70-72: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoHeatmapLegend.Rd:33: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoHeatmapLegend.Rd:34: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoPixels.Rd:30: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoPixels.Rd:31: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoPixels.Rd:32: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoPixels.Rd:39-40: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoPixels.Rd:41-42: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoPixels.Rd:43-44: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoPixels.Rd:45-46: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoSegments.Rd:64: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoSegments.Rd:65: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoSegments.Rd:66: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoXaxis.Rd:31: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoXaxis.Rd:32: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoYaxis.Rd:31: Lost braces in \itemize; meant \describe ? checkRd: (-1) annoYaxis.Rd:32: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotGenomeLabel.Rd:58: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotGenomeLabel.Rd:59-60: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotGenomeLabel.Rd:61-62: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotGenomeLabel.Rd:80: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotGenomeLabel.Rd:81-83: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotHicRectangle.Rd:55: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotHicRectangle.Rd:56: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotHicRectangle.Rd:57: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotHicSquare.Rd:58: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotHicSquare.Rd:59: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotHicSquare.Rd:60: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotHicSquare.Rd:97: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotHicSquare.Rd:98: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotHicSquare.Rd:99: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotHicTriangle.Rd:54: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotHicTriangle.Rd:55: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotHicTriangle.Rd:56: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotIdeogram.Rd:40: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotIdeogram.Rd:41: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotLegend.Rd:42: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotLegend.Rd:43: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotManhattan.Rd:45: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotManhattan.Rd:46-47: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotManhattan.Rd:48-49: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotManhattan.Rd:50-51: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotMultiSignal.Rd:103-104: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotMultiSignal.Rd:105-106: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotPairs.Rd:58: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotPairs.Rd:59: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotPairsArches.Rd:56: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotPairsArches.Rd:57: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotPairsArches.Rd:79: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotPairsArches.Rd:80: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotRanges.Rd:62: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotRanges.Rd:63: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotRanges.Rd:70: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotRanges.Rd:71: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSegments.Rd:68: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSegments.Rd:69: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSegments.Rd:70: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSignal.Rd:104: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSignal.Rd:105: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotTranscripts.Rd:88: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotTranscripts.Rd:89: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotTranscripts.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotTranscripts.Rd:91-92: Lost braces in \itemize; meant \describe ? checkRd: (-1) readBigwig.Rd:29: Lost braces in \itemize; meant \describe ? checkRd: (-1) readBigwig.Rd:30: Lost braces in \itemize; meant \describe ? checkRd: (-1) readBigwig.Rd:31: Lost braces in \itemize; meant \describe ? checkRd: (-1) readHic.Rd:54: Lost braces in \itemize; meant \describe ? checkRd: (-1) readHic.Rd:55: Lost braces in \itemize; meant \describe ? checkRd: (-1) readHic.Rd:68: Lost braces in \itemize; meant \describe ? checkRd: (-1) readHic.Rd:69: Lost braces in \itemize; meant \describe ? checkRd: (-1) readHic.Rd:70: Lost braces in \itemize; meant \describe ? * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking R/sysdata.rda ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking compiled code ... NOTE Note: information on .o files is not available * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed plotRaster 8.386 0.545 8.959 plotIdeogram 4.225 0.341 5.497 readCool 0.786 0.630 162.031 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 3 NOTEs See ‘/Users/biocbuild/bbs-3.20-bioc/meat/plotgardener.Rcheck/00check.log’ for details.
plotgardener.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL plotgardener ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library’ * installing *source* package ‘plotgardener’ ... ** using staged installation ** libs using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’ using SDK: ‘MacOSX11.3.sdk’ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/Rcpp/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/Rcpp/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c checkRow.cpp -o checkRow.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/Rcpp/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c rebinBigwig.cpp -o rebinBigwig.o clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o plotgardener.so RcppExports.o checkRow.o rebinBigwig.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/00LOCK-plotgardener/00new/plotgardener/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (plotgardener)
plotgardener.Rcheck/tests/testthat.Rout
R version 4.4.1 (2024-06-14) -- "Race for Your Life" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-apple-darwin20 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(plotgardener) Attaching package: 'plotgardener' The following object is masked from 'package:base': c > > test_check("plotgardener") Loading required package: GenomicFeatures Loading required package: BiocGenerics Attaching package: 'BiocGenerics' The following objects are masked from 'package:stats': IQR, mad, sd, var, xtabs The following objects are masked from 'package:base': Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append, as.data.frame, basename, cbind, colnames, dirname, do.call, duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted, lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind, rownames, sapply, saveRDS, setdiff, table, tapply, union, unique, unsplit, which.max, which.min Loading required package: S4Vectors Loading required package: stats4 Attaching package: 'S4Vectors' The following object is masked from 'package:utils': findMatches The following objects are masked from 'package:base': I, expand.grid, unname Loading required package: IRanges Loading required package: GenomeInfoDb Loading required package: GenomicRanges Loading required package: AnnotationDbi Loading required package: Biobase Welcome to Bioconductor Vignettes contain introductory material; view with 'browseVignettes()'. To cite Bioconductor, see 'citation("Biobase")', and for packages 'citation("pkgname")'. Using poppler version 23.04.0 Loading required package: BiocFileCache Loading required package: dbplyr Attaching package: 'AnnotationHub' The following object is masked from 'package:Biobase': cache pairs[pairs1] arches[arches1] ranges[ranges1] transcripts[transcripts1] start, endLoading required package: SummarizedExperiment Loading required package: MatrixGenerics Loading required package: matrixStats Attaching package: 'matrixStats' The following objects are masked from 'package:Biobase': anyMissing, rowMedians Attaching package: 'MatrixGenerics' The following objects are masked from 'package:matrixStats': colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, colCounts, colCummaxs, colCummins, colCumprods, colCumsums, colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, colWeightedMeans, colWeightedMedians, colWeightedSds, colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, rowWeightedMads, rowWeightedMeans, rowWeightedMedians, rowWeightedSds, rowWeightedVars The following object is masked from 'package:Biobase': rowMedians Read in hic file with KR normalization at 1e+05 BP resolution. trying URL 'https://usgs2.osn.mghpcc.org/cooler01/examples/hg19/Rao2014-IMR90-MboI-allreps-filtered.1000kb.cool' Content type 'binary/octet-stream' length 4103444 bytes (3.9 MB) ================================================== downloaded 3.9 MB trying URL 'https://zenodo.org/records/10906240/files/LEUK_HEK_PJA27_inter_30.mcool?download=1' Content type 'application/octet-stream' length 55194561 bytes (52.6 MB) ================================================== downloaded 52.6 MB signal[signal1_h] signal[signal1_h] [ FAIL 0 | WARN 0 | SKIP 0 | PASS 133 ] > > proc.time() user system elapsed 35.170 2.491 99.689
plotgardener.Rcheck/plotgardener-Ex.timings
name | user | system | elapsed | |
annoDomains | 1.219 | 0.045 | 1.270 | |
annoGenomeLabel | 2.054 | 0.117 | 2.182 | |
annoHeatmapLegend | 1.137 | 0.035 | 1.178 | |
annoHighlight | 0.632 | 0.041 | 0.684 | |
annoPixels | 0.713 | 0.055 | 0.771 | |
annoSegments | 1.401 | 0.069 | 1.479 | |
annoText | 0.751 | 0.025 | 0.778 | |
annoXaxis | 1.113 | 0.039 | 1.156 | |
annoYaxis | 0.446 | 0.033 | 0.481 | |
annoZoomLines | 1.931 | 0.087 | 2.028 | |
assembly | 0.000 | 0.000 | 0.001 | |
c | 0.000 | 0.000 | 0.001 | |
calcSignalRange | 0.241 | 0.014 | 0.256 | |
colorby | 0.540 | 0.009 | 0.550 | |
defaultPackages | 0.027 | 0.005 | 0.032 | |
genomes | 0 | 0 | 0 | |
mapColors | 0.077 | 0.003 | 0.080 | |
pageCreate | 0.033 | 0.001 | 0.035 | |
pageGuideHide | 0.027 | 0.001 | 0.029 | |
pageGuideHorizontal | 0.023 | 0.000 | 0.025 | |
pageGuideShow | 0.607 | 0.049 | 0.661 | |
pageGuideVertical | 0.077 | 0.004 | 0.082 | |
pageLayoutCol | 0.001 | 0.000 | 0.001 | |
pageLayoutRow | 0.001 | 0.000 | 0.000 | |
pagePlotPlace | 0.464 | 0.036 | 0.507 | |
pagePlotRemove | 0.352 | 0.026 | 0.382 | |
pgParams | 1.612 | 0.096 | 1.715 | |
plotCircle | 0.022 | 0.001 | 0.024 | |
plotGG | 0.181 | 0.007 | 0.188 | |
plotGenes | 3.872 | 0.094 | 3.981 | |
plotGenomeLabel | 1.497 | 0.053 | 1.554 | |
plotHicRectangle | 0.359 | 0.023 | 0.384 | |
plotHicSquare | 0.509 | 0.035 | 0.547 | |
plotHicTriangle | 0.899 | 0.051 | 0.954 | |
plotIdeogram | 4.225 | 0.341 | 5.497 | |
plotLegend | 0.262 | 0.021 | 0.286 | |
plotManhattan | 1.407 | 0.089 | 1.505 | |
plotMultiSignal | 1.521 | 0.046 | 1.579 | |
plotPairs | 0.114 | 0.005 | 0.119 | |
plotPairsArches | 0.117 | 0.006 | 0.123 | |
plotPolygon | 0.040 | 0.003 | 0.044 | |
plotRanges | 0.138 | 0.006 | 0.145 | |
plotRaster | 8.386 | 0.545 | 8.959 | |
plotRect | 0.377 | 0.031 | 0.409 | |
plotSegments | 0.045 | 0.002 | 0.048 | |
plotSignal | 0.574 | 0.072 | 0.646 | |
plotText | 0.037 | 0.003 | 0.041 | |
plotTranscripts | 0.707 | 0.031 | 0.740 | |
readBigwig | 0.209 | 0.020 | 0.229 | |
readCool | 0.786 | 0.630 | 162.031 | |
readHic | 0.006 | 0.002 | 0.110 | |