Tim Daniel Rose
| Snapshot Date: 2025-10-13 13:40 -0400 (Mon, 13 Oct 2025) |
| git_url: https://git.bioconductor.org/packages/mosbi |
| git_branch: RELEASE_3_21 |
| git_last_commit: 536a484 |
| git_last_commit_date: 2025-04-15 12:42:03 -0400 (Tue, 15 Apr 2025) |
| Back to Multiple platform build/check report for BioC 3.21: simplified long |
|
This page was generated on 2025-10-16 11:41 -0400 (Thu, 16 Oct 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4833 |
| merida1 | macOS 12.7.6 Monterey | x86_64 | 4.5.1 RC (2025-06-05 r88288) -- "Great Square Root" | 4614 |
| kjohnson1 | macOS 13.7.5 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4555 |
| kunpeng2 | Linux (openEuler 24.03 LTS) | aarch64 | R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" | 4586 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1338/2341 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| mosbi 1.14.0 (landing page) Tim Daniel Rose
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| merida1 | macOS 12.7.6 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kjohnson1 | macOS 13.7.5 Ventura / arm64 | OK | OK | WARNINGS | OK | | ||||||||
| kunpeng2 | Linux (openEuler 24.03 LTS) / aarch64 | OK | ERROR | skipped | ||||||||||
|
To the developers/maintainers of the mosbi package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/mosbi.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
| Package: mosbi |
| Version: 1.14.0 |
| Command: /home/biocbuild/R/R/bin/R CMD INSTALL mosbi |
| StartedAt: 2025-10-13 20:24:15 -0000 (Mon, 13 Oct 2025) |
| EndedAt: 2025-10-13 20:26:10 -0000 (Mon, 13 Oct 2025) |
| EllapsedTime: 114.2 seconds |
| RetCode: 0 |
| Status: OK |
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###
### Running command:
###
### /home/biocbuild/R/R/bin/R CMD INSTALL mosbi
###
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##############################################################################
* installing to library ‘/home/biocbuild/R/R-devel_2025-02-19/site-library’
* installing *source* package ‘mosbi’ ...
** this is package ‘mosbi’ version ‘1.14.0’
** using staged installation
** libs
using C++ compiler: ‘aarch64-unknown-linux-gnu-g++ (GCC) 14.2.0’
using C++17
/opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/Rcpp/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o
/opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/Rcpp/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c attr_graph.cpp -o attr_graph.o
/opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/Rcpp/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c attributeConnector.cpp -o attributeConnector.o
/opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/Rcpp/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c attribute_overlap.cpp -o attribute_overlap.o
/opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/Rcpp/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c bicluster_methods.cpp -o bicluster_methods.o
bicluster_methods.cpp: In function ‘int is_subset_or_identical(Rcpp::S4&, Rcpp::S4&)’:
bicluster_methods.cpp:130:18: warning: loop variable ‘i’ of type ‘const int&’ binds to a temporary constructed from type ‘Rcpp::traits::storage_type<14>::type’ {aka ‘double’} [-Wrange-loop-construct]
130 | for(const int& i : row1){
| ^
bicluster_methods.cpp:130:18: note: use non-reference type ‘const int’ to make the copy explicit or ‘const Rcpp::traits::storage_type<14>::type&’ {aka ‘const double&’} to prevent copying
bicluster_methods.cpp:137:18: warning: loop variable ‘j’ of type ‘const int&’ binds to a temporary constructed from type ‘Rcpp::traits::storage_type<14>::type’ {aka ‘double’} [-Wrange-loop-construct]
137 | for(const int& j : col1){
| ^
bicluster_methods.cpp:137:18: note: use non-reference type ‘const int’ to make the copy explicit or ‘const Rcpp::traits::storage_type<14>::type&’ {aka ‘const double&’} to prevent copying
/opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/Rcpp/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c boost_graph.cpp -o boost_graph.o
In file included from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/scoped_ptr.hpp:13,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/graph/adjacency_list.hpp:22,
from boost_graph.cpp:2:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/smart_ptr/scoped_ptr.hpp:75:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
75 | explicit scoped_ptr( std::auto_ptr<T> p ) noexcept : px( p.release() )
| ^~~~~~~~
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/memory:78,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/unordered/detail/opt_storage.hpp:11,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/unordered/detail/archive_constructed.hpp:12,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/unordered/detail/serialize_container.hpp:14,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/unordered/detail/serialize_fca_container.hpp:12,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/unordered/unordered_set.hpp:18,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/unordered_set.hpp:17,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/graph/adjacency_list.hpp:20:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/aux_/na_assert.hpp:23,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/arg.hpp:25,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/placeholders.hpp:24,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_categories.hpp:16,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/graph/graph_traits.hpp:25,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/graph/adjacency_list.hpp:24:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses]
194 | failed ************ (Pred::************
| ^~~~~~~~~~~~~~~~~~~
195 | assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
196 | );
| ~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses
194 | failed ************ (Pred::************
| ^~~~~~~~~~~~~~~~~~~
| -
195 | assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
196 | );
| ~
| -
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses]
199 | failed ************ (boost::mpl::not_<Pred>::************
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
201 | );
| ~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses
199 | failed ************ (boost::mpl::not_<Pred>::************
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
| -
200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
201 | );
| ~
| -
In file included from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:17,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/property_map/vector_property_map.hpp:14,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/property_map/property_map.hpp:598,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/graph/adjacency_list.hpp:27:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/smart_ptr/detail/shared_count.hpp:326:33: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
326 | explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:354:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
354 | explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:365:22: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
365 | shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:423:34: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
423 | shared_ptr & operator=( std::auto_ptr<Y> & r )
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:430:34: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
430 | shared_ptr & operator=( std::auto_ptr<Y> && r )
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function ‘boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:432:38: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
432 | this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/bind/mem_fn.hpp:23,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mem_fn.hpp:22,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/function/function_template.hpp:16,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/function/function3.hpp:10,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/property_map/dynamic_property_map.hpp:25,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/graph/graphml.hpp:28,
from boost_graph.cpp:3:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/get_pointer.hpp: At global scope:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
48 | template<class T> T * get_pointer(std::auto_ptr<T> const& p)
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/Rcpp/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c boost_write.cpp -o boost_write.o
In file included from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/scoped_ptr.hpp:13,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/graph/adjacency_list.hpp:22,
from boost_write.cpp:2:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/smart_ptr/scoped_ptr.hpp:75:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
75 | explicit scoped_ptr( std::auto_ptr<T> p ) noexcept : px( p.release() )
| ^~~~~~~~
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/memory:78,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/unordered/detail/opt_storage.hpp:11,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/unordered/detail/archive_constructed.hpp:12,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/unordered/detail/serialize_container.hpp:14,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/unordered/detail/serialize_fca_container.hpp:12,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/unordered/unordered_set.hpp:18,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/unordered_set.hpp:17,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/graph/adjacency_list.hpp:20:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/aux_/na_assert.hpp:23,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/arg.hpp:25,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/placeholders.hpp:24,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_categories.hpp:16,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/graph/graph_traits.hpp:25,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/graph/adjacency_list.hpp:24:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses]
194 | failed ************ (Pred::************
| ^~~~~~~~~~~~~~~~~~~
195 | assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
196 | );
| ~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses
194 | failed ************ (Pred::************
| ^~~~~~~~~~~~~~~~~~~
| -
195 | assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
196 | );
| ~
| -
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses]
199 | failed ************ (boost::mpl::not_<Pred>::************
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
201 | );
| ~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses
199 | failed ************ (boost::mpl::not_<Pred>::************
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
| -
200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
201 | );
| ~
| -
In file included from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:17,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/property_map/vector_property_map.hpp:14,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/property_map/property_map.hpp:598,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/graph/adjacency_list.hpp:27:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/smart_ptr/detail/shared_count.hpp:326:33: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
326 | explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:354:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
354 | explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:365:22: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
365 | shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:423:34: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
423 | shared_ptr & operator=( std::auto_ptr<Y> & r )
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:430:34: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
430 | shared_ptr & operator=( std::auto_ptr<Y> && r )
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function ‘boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:432:38: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
432 | this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/bind/mem_fn.hpp:23,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mem_fn.hpp:22,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/function/function_template.hpp:16,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/function/function3.hpp:10,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/property_map/dynamic_property_map.hpp:25,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/graph/graphml.hpp:28,
from boost_write.cpp:3:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/get_pointer.hpp: At global scope:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
48 | template<class T> T * get_pointer(std::auto_ptr<T> const& p)
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/Rcpp/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c distance_matrix.cpp -o distance_matrix.o
distance_matrix.cpp: In member function ‘virtual void SimWorker::operator()(std::size_t, std::size_t)’:
distance_matrix.cpp:244:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
244 | for(int i=begin;i<end;i++){
| ~^~~~
In file included from /home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include/tbb/tbb.h:32,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include/RcppParallel/TBB.h:10,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include/RcppParallel.h:24,
from distance_matrix.cpp:2:
/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include/tbb/atomic.h: In instantiation of ‘tbb::atomic<T>& tbb::internal::as_atomic(T&) [with T = long unsigned int]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include/tbb/tbb_thread.h:251:29: required from here
251 | return as_atomic(location.my_id).compare_and_swap(value.my_id, comparand.my_id);
| ~~~~~~~~~^~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include/tbb/atomic.h:544:12: warning: casting ‘long unsigned int’ to ‘tbb::atomic<long unsigned int>&’ does not use ‘constexpr tbb::atomic<long unsigned int>::atomic(long unsigned int)’ [-Wcast-user-defined]
544 | return (atomic<T>&)t;
| ^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include/tbb/atomic.h: In instantiation of ‘tbb::atomic<T>& tbb::internal::as_atomic(T&) [with T = tbb::interface5::internal::hash_map_base::bucket*]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include/tbb/concurrent_hash_map.h:291:31: required from here
291 | && as_atomic(my_table[new_seg]).compare_and_swap(is_allocating, NULL) == NULL )
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include/tbb/atomic.h:544:12: warning: casting ‘tbb::interface5::internal::hash_map_base::bucket*’ to ‘tbb::atomic<tbb::interface5::internal::hash_map_base::bucket*>&’ does not use ‘constexpr tbb::atomic<T*>::atomic(T*) [with T = tbb::interface5::internal::hash_map_base::bucket]’ [-Wcast-user-defined]
544 | return (atomic<T>&)t;
| ^~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/Rcpp/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c extractBF.cpp -o extractBF.o
In file included from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/aux_/na_assert.hpp:23,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/arg.hpp:25,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/placeholders.hpp:24,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_categories.hpp:16,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:13,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/iterator_range_core.hpp:27,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string.hpp:19,
from extractBF.cpp:3:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses]
194 | failed ************ (Pred::************
| ^~~~~~~~~~~~~~~~~~~
195 | assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
196 | );
| ~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses
194 | failed ************ (Pred::************
| ^~~~~~~~~~~~~~~~~~~
| -
195 | assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
196 | );
| ~
| -
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses]
199 | failed ************ (boost::mpl::not_<Pred>::************
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
201 | );
| ~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses
199 | failed ************ (boost::mpl::not_<Pred>::************
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
| -
200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
201 | );
| ~
| -
In file included from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/bind/mem_fn.hpp:23,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mem_fn.hpp:22,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/function/function_template.hpp:16,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/function.hpp:16,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/detail/find_iterator.hpp:18,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/find_iterator.hpp:24,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:27,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:16,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string.hpp:23:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
48 | template<class T> T * get_pointer(std::auto_ptr<T> const& p)
| ^~~~~~~~
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/memory:78,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/function/function_base.hpp:23,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/function/function_template.hpp:14:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
extractBF.cpp: In function ‘Rcpp::S4 getBFCluster(Rcpp::String, int)’:
extractBF.cpp:92:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
92 | for(int i=0; i<results.size();i++){
| ~^~~~~~~~~~~~~~~
In file included from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/assert.hpp:35,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:20,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/iterator_range_core.hpp:38:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::constraint<Model>::failed() [with Model = boost::algorithm::FinderConcept<boost::algorithm::detail::token_finderF<getBFCluster(Rcpp::String, int)::<lambda(char)> >, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:81:13: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<getBFCluster(Rcpp::String, int)::<lambda(char)> >]’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = getBFCluster(Rcpp::String, int)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractBF.cpp:79:21: required from here
79 | boost::split(results, line, [](char c){return c == ',';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:65:52: warning: ‘this’ pointer is null [-Wnonnull]
65 | static void failed() { ((Model*)0)->constraints(); }
| ~~~~~~~~~~~~~~~~~~~~~~~~^~
In file included from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:26:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/concept.hpp:40:18: note: in a call to non-static member function ‘void boost::algorithm::FinderConcept<FinderT, IteratorT>::constraints() [with FinderT = boost::algorithm::detail::token_finderF<getBFCluster(Rcpp::String, int)::<lambda(char)> >; IteratorT = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >]’
40 | void constraints()
| ^~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::CopyConstructible<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
125 | struct IncrementableIteratorConcept : CopyConstructible<Iterator>
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
147 | struct SinglePassIteratorConcept
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<getBFCluster(Rcpp::String, int)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = getBFCluster(Rcpp::String, int)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractBF.cpp:79:21: required from here
79 | boost::split(results, line, [](char c){return c == ',';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
In file included from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:31:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::CopyConstructible<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_<void (*)(boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>)>’
72 | struct requirement_<void(*)(Model)>
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_concepts.hpp:114:7: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<getBFCluster(Rcpp::String, int)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = getBFCluster(Rcpp::String, int)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractBF.cpp:79:21: required from here
79 | boost::split(results, line, [](char c){return c == ',';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>]’
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_concepts.hpp:114:7: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
147 | struct SinglePassIteratorConcept
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<getBFCluster(Rcpp::String, int)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = getBFCluster(Rcpp::String, int)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractBF.cpp:79:21: required from here
79 | boost::split(results, line, [](char c){return c == ',';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible<X, Y>::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::incrementable_traversal_tag]’
37 | ~model()
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
208 | BOOST_CONCEPT_USAGE(Convertible) {
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
147 | struct SinglePassIteratorConcept
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<getBFCluster(Rcpp::String, int)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = getBFCluster(Rcpp::String, int)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractBF.cpp:79:21: required from here
79 | boost::split(results, line, [](char c){return c == ',';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::EqualityComparable<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
147 | struct SinglePassIteratorConcept
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<getBFCluster(Rcpp::String, int)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = getBFCluster(Rcpp::String, int)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractBF.cpp:79:21: required from here
79 | boost::split(results, line, [](char c){return c == ',';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::EqualityComparable<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_<void (*)(boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>)>’
72 | struct requirement_<void(*)(Model)>
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:152:13: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<getBFCluster(Rcpp::String, int)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = getBFCluster(Rcpp::String, int)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractBF.cpp:79:21: required from here
79 | boost::split(results, line, [](char c){return c == ',';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>]’
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:152:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_<void (*)(boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >)>’
72 | struct requirement_<void(*)(Model)>
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:278:9: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<getBFCluster(Rcpp::String, int)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = getBFCluster(Rcpp::String, int)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractBF.cpp:79:21: required from here
79 | boost::split(results, line, [](char c){return c == ',';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible<X, Y>::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::single_pass_traversal_tag]’
37 | ~model()
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
208 | BOOST_CONCEPT_USAGE(Convertible) {
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_<void (*)(boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >)>’
72 | struct requirement_<void(*)(Model)>
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:278:9: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<getBFCluster(Rcpp::String, int)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = getBFCluster(Rcpp::String, int)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractBF.cpp:79:21: required from here
79 | boost::split(results, line, [](char c){return c == ',';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:278:9: required from ‘struct boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > > >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_<void (*)(boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >)>’
72 | struct requirement_<void(*)(Model)>
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/algorithm/equal.hpp:174:13: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<getBFCluster(Rcpp::String, int)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = getBFCluster(Rcpp::String, int)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractBF.cpp:79:21: required from here
79 | boost::split(results, line, [](char c){return c == ',';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept<Iterator>::~SinglePassIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >]’
37 | ~model()
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept)
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:284:9: required from ‘struct boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > > >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_<void (*)(boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >)>’
72 | struct requirement_<void(*)(Model)>
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/algorithm/equal.hpp:174:13: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<getBFCluster(Rcpp::String, int)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = getBFCluster(Rcpp::String, int)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractBF.cpp:79:21: required from here
79 | boost::split(results, line, [](char c){return c == ',';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/algorithm/equal.hpp:174:13: required from ‘bool boost::range::equal(const SinglePassRange1&, const SinglePassRange2&) [with SinglePassRange1 = boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >; SinglePassRange2 = boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/iterator_range_core.hpp:644:32: required from ‘bool boost::operator==(const iterator_range<IteratorT>&, const iterator_range<Iterator2T>&) [with Iterator1T = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >; Iterator2T = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >]’
644 | return boost::equal( l, r );
| ~~~~~~~~~~~~^~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/find_iterator.hpp:359:32: required from ‘bool boost::algorithm::split_iterator<IteratorT>::equal(const boost::algorithm::split_iterator<IteratorT>&) const [with IteratorT = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >]’
359 | m_Match==Other.m_Match &&
| ~~~~~~~^~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:649:26: required from ‘static bool boost::iterators::iterator_core_access::equal(const Facade1&, const Facade2&, mpl_::true_) [with Facade1 = boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >; Facade2 = boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >; mpl_::true_ = mpl_::bool_<true>]’
649 | return f1.equal(f2);
| ~~~~~~~~^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:981:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator==(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >; V1 = const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >; TC1 = forward_traversal_tag; Reference1 = const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >&; Difference1 = long int; Derived2 = boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >; V2 = const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >; TC2 = forward_traversal_tag; Reference2 = const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >&; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_adaptor.hpp:305:29: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<getBFCluster(Rcpp::String, int)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = getBFCluster(Rcpp::String, int)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractBF.cpp:79:21: required from here
79 | boost::split(results, line, [](char c){return c == ',';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::SinglePassRangeConcept<T>::~SinglePassRangeConcept() [with T = const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
37 | ~model()
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept)
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::CopyConstructible<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::CopyConstructible<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
125 | struct IncrementableIteratorConcept : CopyConstructible<Iterator>
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
147 | struct SinglePassIteratorConcept
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<getBFCluster(Rcpp::String, int)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = getBFCluster(Rcpp::String, int)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractBF.cpp:79:21: required from here
79 | boost::split(results, line, [](char c){return c == ',';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull]
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::CopyConstructible<TT>::~CopyConstructible() [with TT = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >]’
37 | ~model()
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:167:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
167 | BOOST_CONCEPT_USAGE(CopyConstructible) {
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >]’
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<getBFCluster(Rcpp::String, int)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = getBFCluster(Rcpp::String, int)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractBF.cpp:79:21: required from here
79 | boost::split(results, line, [](char c){return c == ',';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull]
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible<X, Y>::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::incrementable_traversal_tag]’
37 | ~model()
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
208 | BOOST_CONCEPT_USAGE(Convertible) {
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
147 | struct SinglePassIteratorConcept
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<getBFCluster(Rcpp::String, int)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = getBFCluster(Rcpp::String, int)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractBF.cpp:79:21: required from here
79 | boost::split(results, line, [](char c){return c == ',';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull]
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::IncrementableIteratorConcept<Iterator>::~IncrementableIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >]’
37 | ~model()
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:136:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
136 | BOOST_CONCEPT_USAGE(IncrementableIteratorConcept)
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::EqualityComparable<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::EqualityComparable<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
147 | struct SinglePassIteratorConcept
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<getBFCluster(Rcpp::String, int)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = getBFCluster(Rcpp::String, int)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractBF.cpp:79:21: required from here
79 | boost::split(results, line, [](char c){return c == ',';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull]
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::EqualityComparable<TT>::~EqualityComparable() [with TT = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >]’
37 | ~model()
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:233:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
233 | BOOST_CONCEPT_USAGE(EqualityComparable) {
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >]’
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<getBFCluster(Rcpp::String, int)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = getBFCluster(Rcpp::String, int)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractBF.cpp:79:21: required from here
79 | boost::split(results, line, [](char c){return c == ',';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull]
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible<X, Y>::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::single_pass_traversal_tag]’
37 | ~model()
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
208 | BOOST_CONCEPT_USAGE(Convertible) {
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<getBFCluster(Rcpp::String, int)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = getBFCluster(Rcpp::String, int)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractBF.cpp:79:21: required from here
79 | boost::split(results, line, [](char c){return c == ',';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull]
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept<Iterator>::~SinglePassIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >]’
37 | ~model()
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept)
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > > >]’
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:284:9: required from ‘struct boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > > >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<getBFCluster(Rcpp::String, int)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = getBFCluster(Rcpp::String, int)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractBF.cpp:79:21: required from here
79 | boost::split(results, line, [](char c){return c == ',';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull]
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::SinglePassRangeConcept<T>::~SinglePassRangeConcept() [with T = const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
37 | ~model()
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept)
| ^~~~~~~~~~~~~~~~~~~
In member function ‘void boost::function_n<R, T>::assign_to_own(const boost::function_n<R, T>&) [with R = boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >; T = {__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >}]’,
inlined from ‘void boost::function_n<R, T>::assign_to_own(const boost::function_n<R, T>&) [with R = boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >; T = {__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >}]’ at /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/function/function_template.hpp:891:10,
inlined from ‘boost::function_n<R, T>::function_n(const boost::function_n<R, T>&) [with R = boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >; T = {__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >}]’ at /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/function/function_template.hpp:774:26,
inlined from ‘boost::algorithm::detail::find_iterator_base<IteratorT>::find_iterator_base(const boost::algorithm::detail::find_iterator_base<IteratorT>&) [with IteratorT = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >]’ at /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/detail/find_iterator.hpp:46:17,
inlined from ‘boost::algorithm::split_iterator<IteratorT>::split_iterator(const boost::algorithm::split_iterator<IteratorT>&) [with IteratorT = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >]’ at /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/find_iterator.hpp:260:36,
inlined from ‘boost::iterators::iterator_adaptor<boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, std::__cxx11::basic_string<char>, boost::use_default, std::__cxx11::basic_string<char>, boost::use_default>::iterator_adaptor(const boost::iterators::iterator_adaptor<boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, std::__cxx11::basic_string<char>, boost::use_default, std::__cxx11::basic_string<char>, boost::use_default>&)’ at /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_adaptor.hpp:249:9,
inlined from ‘boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>::transform_iterator(const boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>&)’ at /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/transform_iterator.hpp:83:9,
inlined from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’ at /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23,
inlined from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<getBFCluster(Rcpp::String, int)::<lambda(char)> >]’ at /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31,
inlined from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = getBFCluster(Rcpp::String, int)::<lambda(char)>]’ at /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50,
inlined from ‘Rcpp::S4 getBFCluster(Rcpp::String, int)’ at extractBF.cpp:79:21:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/function/function_template.hpp:908:22: warning: ‘*(unsigned char (*)[24])((char*)&<unnamed> + offsetof(boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, boost::use_default, boost::use_default>,boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, boost::use_default, boost::use_default>::<unnamed>.boost::iterators::iterator_adaptor<boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, boost::use_default, boost::use_default>, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, boost::use_default, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, boost::use_default>::m_iterator.boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >::<unnamed>.boost::algorithm::detail::find_iterator_base<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >::m_Finder.boost::function_n<boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >::<unnamed>.boost::function_base::functor))’ may be used uninitialized [-Wmaybe-uninitialized]
908 | std::memcpy(this->functor.data, f.functor.data, sizeof(boost::detail::function::function_buffer));
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp: In function ‘Rcpp::S4 getBFCluster(Rcpp::String, int)’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: note: ‘<anonymous>’ declared here
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/Rcpp/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c extractQUBIC2.cpp -o extractQUBIC2.o
In file included from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/aux_/na_assert.hpp:23,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/arg.hpp:25,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/placeholders.hpp:24,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_categories.hpp:16,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:13,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/iterator_range_core.hpp:27,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string.hpp:19,
from extractQUBIC2.cpp:7:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses]
194 | failed ************ (Pred::************
| ^~~~~~~~~~~~~~~~~~~
195 | assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
196 | );
| ~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses
194 | failed ************ (Pred::************
| ^~~~~~~~~~~~~~~~~~~
| -
195 | assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
196 | );
| ~
| -
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses]
199 | failed ************ (boost::mpl::not_<Pred>::************
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
201 | );
| ~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses
199 | failed ************ (boost::mpl::not_<Pred>::************
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
| -
200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
201 | );
| ~
| -
In file included from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/bind/mem_fn.hpp:23,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/mem_fn.hpp:22,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/function/function_template.hpp:16,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/function.hpp:16,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/detail/find_iterator.hpp:18,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/find_iterator.hpp:24,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:27,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:16,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string.hpp:23:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
48 | template<class T> T * get_pointer(std::auto_ptr<T> const& p)
| ^~~~~~~~
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/shared_ptr_base.h:59,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/shared_ptr.h:53,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/regex:49,
from extractQUBIC2.cpp:5:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/assert.hpp:35,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:20,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/iterator_range_core.hpp:38:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::constraint<Model>::failed() [with Model = boost::algorithm::FinderConcept<boost::algorithm::detail::token_finderF<extract_gene(std::string&, int&)::<lambda(char)> >, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:81:13: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<extract_gene(std::string&, int&)::<lambda(char)> >]’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = extract_gene(std::string&, int&)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractQUBIC2.cpp:29:17: required from here
29 | boost::split(search_results, line, [](char c){return c == ' ';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:65:52: warning: ‘this’ pointer is null [-Wnonnull]
65 | static void failed() { ((Model*)0)->constraints(); }
| ~~~~~~~~~~~~~~~~~~~~~~~~^~
In file included from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:26:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/concept.hpp:40:18: note: in a call to non-static member function ‘void boost::algorithm::FinderConcept<FinderT, IteratorT>::constraints() [with FinderT = boost::algorithm::detail::token_finderF<extract_gene(std::string&, int&)::<lambda(char)> >; IteratorT = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >]’
40 | void constraints()
| ^~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::constraint<Model>::failed() [with Model = boost::algorithm::FinderConcept<boost::algorithm::detail::token_finderF<extract_cond(std::string&, int&)::<lambda(char)> >, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:81:13: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<extract_cond(std::string&, int&)::<lambda(char)> >]’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = extract_cond(std::string&, int&)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractQUBIC2.cpp:55:17: required from here
55 | boost::split(search_results, line, [](char c){return c == ' ';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:65:52: warning: ‘this’ pointer is null [-Wnonnull]
65 | static void failed() { ((Model*)0)->constraints(); }
| ~~~~~~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/concept.hpp:40:18: note: in a call to non-static member function ‘void boost::algorithm::FinderConcept<FinderT, IteratorT>::constraints() [with FinderT = boost::algorithm::detail::token_finderF<extract_cond(std::string&, int&)::<lambda(char)> >; IteratorT = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >]’
40 | void constraints()
| ^~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::CopyConstructible<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
125 | struct IncrementableIteratorConcept : CopyConstructible<Iterator>
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
147 | struct SinglePassIteratorConcept
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<extract_gene(std::string&, int&)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = extract_gene(std::string&, int&)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractQUBIC2.cpp:29:17: required from here
29 | boost::split(search_results, line, [](char c){return c == ' ';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
In file included from /home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:31:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::CopyConstructible<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_<void (*)(boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>)>’
72 | struct requirement_<void(*)(Model)>
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_concepts.hpp:114:7: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<extract_gene(std::string&, int&)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = extract_gene(std::string&, int&)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractQUBIC2.cpp:29:17: required from here
29 | boost::split(search_results, line, [](char c){return c == ' ';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>]’
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_concepts.hpp:114:7: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
147 | struct SinglePassIteratorConcept
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<extract_gene(std::string&, int&)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = extract_gene(std::string&, int&)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractQUBIC2.cpp:29:17: required from here
29 | boost::split(search_results, line, [](char c){return c == ' ';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible<X, Y>::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::incrementable_traversal_tag]’
37 | ~model()
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
208 | BOOST_CONCEPT_USAGE(Convertible) {
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
147 | struct SinglePassIteratorConcept
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<extract_gene(std::string&, int&)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = extract_gene(std::string&, int&)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractQUBIC2.cpp:29:17: required from here
29 | boost::split(search_results, line, [](char c){return c == ' ';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::EqualityComparable<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
147 | struct SinglePassIteratorConcept
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<extract_gene(std::string&, int&)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = extract_gene(std::string&, int&)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractQUBIC2.cpp:29:17: required from here
29 | boost::split(search_results, line, [](char c){return c == ' ';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::EqualityComparable<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_<void (*)(boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>)>’
72 | struct requirement_<void(*)(Model)>
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:152:13: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<extract_gene(std::string&, int&)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = extract_gene(std::string&, int&)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractQUBIC2.cpp:29:17: required from here
29 | boost::split(search_results, line, [](char c){return c == ' ';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>]’
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:152:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_<void (*)(boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >)>’
72 | struct requirement_<void(*)(Model)>
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:278:9: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<extract_gene(std::string&, int&)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = extract_gene(std::string&, int&)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractQUBIC2.cpp:29:17: required from here
29 | boost::split(search_results, line, [](char c){return c == ' ';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible<X, Y>::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::single_pass_traversal_tag]’
37 | ~model()
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
208 | BOOST_CONCEPT_USAGE(Convertible) {
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_<void (*)(boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >)>’
72 | struct requirement_<void(*)(Model)>
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:278:9: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<extract_gene(std::string&, int&)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = extract_gene(std::string&, int&)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractQUBIC2.cpp:29:17: required from here
29 | boost::split(search_results, line, [](char c){return c == ' ';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:278:9: required from ‘struct boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > > >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_<void (*)(boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >)>’
72 | struct requirement_<void(*)(Model)>
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/algorithm/equal.hpp:174:13: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<extract_gene(std::string&, int&)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = extract_gene(std::string&, int&)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractQUBIC2.cpp:29:17: required from here
29 | boost::split(search_results, line, [](char c){return c == ' ';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept<Iterator>::~SinglePassIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >]’
37 | ~model()
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept)
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:284:9: required from ‘struct boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > > >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_<void (*)(boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >)>’
72 | struct requirement_<void(*)(Model)>
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/algorithm/equal.hpp:174:13: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<extract_gene(std::string&, int&)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = extract_gene(std::string&, int&)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractQUBIC2.cpp:29:17: required from here
29 | boost::split(search_results, line, [](char c){return c == ' ';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/algorithm/equal.hpp:174:13: required from ‘bool boost::range::equal(const SinglePassRange1&, const SinglePassRange2&) [with SinglePassRange1 = boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >; SinglePassRange2 = boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/iterator_range_core.hpp:644:32: required from ‘bool boost::operator==(const iterator_range<IteratorT>&, const iterator_range<Iterator2T>&) [with Iterator1T = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >; Iterator2T = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >]’
644 | return boost::equal( l, r );
| ~~~~~~~~~~~~^~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/find_iterator.hpp:359:32: required from ‘bool boost::algorithm::split_iterator<IteratorT>::equal(const boost::algorithm::split_iterator<IteratorT>&) const [with IteratorT = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >]’
359 | m_Match==Other.m_Match &&
| ~~~~~~~^~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:649:26: required from ‘static bool boost::iterators::iterator_core_access::equal(const Facade1&, const Facade2&, mpl_::true_) [with Facade1 = boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >; Facade2 = boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >; mpl_::true_ = mpl_::bool_<true>]’
649 | return f1.equal(f2);
| ~~~~~~~~^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:981:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator==(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >; V1 = const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >; TC1 = forward_traversal_tag; Reference1 = const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >&; Difference1 = long int; Derived2 = boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >; V2 = const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >; TC2 = forward_traversal_tag; Reference2 = const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >&; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_adaptor.hpp:305:29: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<extract_gene(std::string&, int&)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = extract_gene(std::string&, int&)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractQUBIC2.cpp:29:17: required from here
29 | boost::split(search_results, line, [](char c){return c == ' ';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::SinglePassRangeConcept<T>::~SinglePassRangeConcept() [with T = const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
37 | ~model()
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept)
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::CopyConstructible<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::CopyConstructible<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
125 | struct IncrementableIteratorConcept : CopyConstructible<Iterator>
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
147 | struct SinglePassIteratorConcept
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<extract_gene(std::string&, int&)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = extract_gene(std::string&, int&)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractQUBIC2.cpp:29:17: required from here
29 | boost::split(search_results, line, [](char c){return c == ' ';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull]
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::CopyConstructible<TT>::~CopyConstructible() [with TT = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >]’
37 | ~model()
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:167:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
167 | BOOST_CONCEPT_USAGE(CopyConstructible) {
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >]’
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<extract_gene(std::string&, int&)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = extract_gene(std::string&, int&)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractQUBIC2.cpp:29:17: required from here
29 | boost::split(search_results, line, [](char c){return c == ' ';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull]
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible<X, Y>::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::incrementable_traversal_tag]’
37 | ~model()
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
208 | BOOST_CONCEPT_USAGE(Convertible) {
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
147 | struct SinglePassIteratorConcept
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<extract_gene(std::string&, int&)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = extract_gene(std::string&, int&)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractQUBIC2.cpp:29:17: required from here
29 | boost::split(search_results, line, [](char c){return c == ' ';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull]
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::IncrementableIteratorConcept<Iterator>::~IncrementableIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >]’
37 | ~model()
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:136:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
136 | BOOST_CONCEPT_USAGE(IncrementableIteratorConcept)
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::EqualityComparable<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::EqualityComparable<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
147 | struct SinglePassIteratorConcept
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<extract_gene(std::string&, int&)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = extract_gene(std::string&, int&)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractQUBIC2.cpp:29:17: required from here
29 | boost::split(search_results, line, [](char c){return c == ' ';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull]
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::EqualityComparable<TT>::~EqualityComparable() [with TT = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >]’
37 | ~model()
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:233:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
233 | BOOST_CONCEPT_USAGE(EqualityComparable) {
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >]’
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<extract_gene(std::string&, int&)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = extract_gene(std::string&, int&)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractQUBIC2.cpp:29:17: required from here
29 | boost::split(search_results, line, [](char c){return c == ' ';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull]
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible<X, Y>::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::single_pass_traversal_tag]’
37 | ~model()
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
208 | BOOST_CONCEPT_USAGE(Convertible) {
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<extract_gene(std::string&, int&)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = extract_gene(std::string&, int&)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractQUBIC2.cpp:29:17: required from here
29 | boost::split(search_results, line, [](char c){return c == ' ';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull]
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept<Iterator>::~SinglePassIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >]’
37 | ~model()
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept)
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > > >]’
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:284:9: required from ‘struct boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >’
92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > >]’
32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0);
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > > >::value’
44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > > > >’
45 | typedef boost::integral_constant<bool, value> type;
| ^~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]’
966 | return_prefix iterator_core_access::base_op( \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
967 | *static_cast<Derived1 const*>(&lhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
968 | , *static_cast<Derived2 const*>(&rhs) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
970 | ); \
| ~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:1673:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
1673 | for (; __first != __last; ++__first)
| ~~~~~~~~^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
711 | _M_range_initialize(__first, __last,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
712 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; FinderT = detail::token_finderF<extract_gene(std::string&, int&)::<lambda(char)> >]’
186 | SequenceSequenceT Tmp(itBegin, itEnd);
| ^~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = std::__cxx11::basic_string<char>&; PredicateT = extract_gene(std::string&, int&)::<lambda(char)>]’
158 | return ::boost::algorithm::iter_split(
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
159 | Result,
| ~~~~~~~
160 | Input,
| ~~~~~~
161 | ::boost::algorithm::token_finder( Pred, eCompress ) );
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
extractQUBIC2.cpp:29:17: required from here
29 | boost::split(search_results, line, [](char c){return c == ' ';});
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull]
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::SinglePassRangeConcept<T>::~SinglePassRangeConcept() [with T = const boost::iterator_range<__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> > >]’
37 | ~model()
| ^
/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept)
| ^~~~~~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/Rcpp/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c full_graph.cpp -o full_graph.o
/opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/Rcpp/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c misc.cpp -o misc.o
/opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/Rcpp/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c network_edge_strength.cpp -o network_edge_strength.o
In file included from /home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include/tbb/tbb.h:32,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include/RcppParallel/TBB.h:10,
from /home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include/RcppParallel.h:24,
from network_edge_strength.cpp:2:
/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include/tbb/atomic.h: In instantiation of ‘tbb::atomic<T>& tbb::internal::as_atomic(T&) [with T = long unsigned int]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include/tbb/tbb_thread.h:251:29: required from here
251 | return as_atomic(location.my_id).compare_and_swap(value.my_id, comparand.my_id);
| ~~~~~~~~~^~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include/tbb/atomic.h:544:12: warning: casting ‘long unsigned int’ to ‘tbb::atomic<long unsigned int>&’ does not use ‘constexpr tbb::atomic<long unsigned int>::atomic(long unsigned int)’ [-Wcast-user-defined]
544 | return (atomic<T>&)t;
| ^~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include/tbb/atomic.h: In instantiation of ‘tbb::atomic<T>& tbb::internal::as_atomic(T&) [with T = tbb::interface5::internal::hash_map_base::bucket*]’:
/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include/tbb/concurrent_hash_map.h:291:31: required from here
291 | && as_atomic(my_table[new_seg]).compare_and_swap(is_allocating, NULL) == NULL )
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include/tbb/atomic.h:544:12: warning: casting ‘tbb::interface5::internal::hash_map_base::bucket*’ to ‘tbb::atomic<tbb::interface5::internal::hash_map_base::bucket*>&’ does not use ‘constexpr tbb::atomic<T*>::atomic(T*) [with T = tbb::interface5::internal::hash_map_base::bucket]’ [-Wcast-user-defined]
544 | return (atomic<T>&)t;
| ^~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/Rcpp/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c sample_biclusters.cpp -o sample_biclusters.o
/opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/Rcpp/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/BH/include' -I'/home/biocbuild/R/R-devel_2025-02-19/site-library/RcppParallel/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c write_matrix.cpp -o write_matrix.o
/opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -shared -L/home/biocbuild/R/R/lib -L/usr/local/lib -o mosbi.so RcppExports.o attr_graph.o attributeConnector.o attribute_overlap.o bicluster_methods.o boost_graph.o boost_write.o distance_matrix.o extractBF.o extractQUBIC2.o full_graph.o misc.o network_edge_strength.o sample_biclusters.o write_matrix.o -L/home/biocbuild/R/R/lib -lR
installing to /home/biocbuild/R/R-devel_2025-02-19/site-library/00LOCK-mosbi/00new/mosbi/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (mosbi)