Mattia Furlan
| Snapshot Date: 2025-11-02 13:45 -0500 (Sun, 02 Nov 2025) |
| git_url: https://git.bioconductor.org/packages/methylPipe |
| git_branch: RELEASE_3_22 |
| git_last_commit: ba28f43 |
| git_last_commit_date: 2025-10-29 10:21:09 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-11-03 12:04 -0500 (Mon, 03 Nov 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" | 4902 |
| lconway | macOS 12.7.6 Monterey | x86_64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4692 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4638 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1275/2361 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| methylPipe 1.44.0 (landing page) Mattia Furlan
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| lconway | macOS 12.7.6 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | WARNINGS | OK | | ||||||||
|
To the developers/maintainers of the methylPipe package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/methylPipe.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: methylPipe |
| Version: 1.44.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data methylPipe |
| StartedAt: 2025-11-02 17:44:58 -0500 (Sun, 02 Nov 2025) |
| EndedAt: 2025-11-02 17:47:52 -0500 (Sun, 02 Nov 2025) |
| EllapsedTime: 174.2 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: methylPipe_1.44.0.tar.gz |
| PackageFileSize: 791.5 KiB |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data methylPipe
###
##############################################################################
##############################################################################
* checking for file ‘methylPipe/DESCRIPTION’ ... OK
* preparing ‘methylPipe’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... OK
* cleaning src
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
NB: this package now depends on R (>= 3.5.0)
WARNING: Added dependency on R >= 3.5.0 because serialized objects in
serialize/load version 3 cannot be read in older versions of R.
File(s) containing such objects:
‘methylPipe/inst/extdata/DMRs.Rdata’
‘methylPipe/inst/extdata/GR_chr20.Rdata’
‘methylPipe/inst/extdata/gec.H1.Rdata’
‘methylPipe/inst/extdata/gec.IMR90.Rdata’
‘methylPipe/inst/extdata/uncov_GR.Rdata’
* building ‘methylPipe_1.44.0.tar.gz’