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This page was generated on 2025-11-05 12:40 -0500 (Wed, 05 Nov 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.3 LTS)x86_644.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" 4902
kjohnson3macOS 13.7.7 Venturaarm644.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" 4638
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1015/2361HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
hypeR 2.8.0  (landing page)
Anthony Federico
Snapshot Date: 2025-11-04 13:45 -0500 (Tue, 04 Nov 2025)
git_url: https://git.bioconductor.org/packages/hypeR
git_branch: RELEASE_3_22
git_last_commit: 7b0ec75
git_last_commit_date: 2025-10-29 10:50:26 -0500 (Wed, 29 Oct 2025)
nebbiolo2Linux (Ubuntu 24.04.3 LTS) / x86_64  ERROR    ERROR  skipped
kjohnson3macOS 13.7.7 Ventura / arm64  ERROR    ERROR  skippedskipped

BUILD results for hypeR on kjohnson3

To the developers/maintainers of the hypeR package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/hypeR.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: hypeR
Version: 2.8.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data hypeR
StartedAt: 2025-11-04 16:44:08 -0500 (Tue, 04 Nov 2025)
EndedAt: 2025-11-04 16:44:09 -0500 (Tue, 04 Nov 2025)
EllapsedTime: 1.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data hypeR
###
##############################################################################
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* checking for file ‘hypeR/DESCRIPTION’ ... OK
* preparing ‘hypeR’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘hypeR’ ...
** this is package ‘hypeR’ version ‘2.8.0’
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Error: object ‘msigdbr_show_species’ is not exported by 'namespace:msigdbr'
Execution halted
ERROR: lazy loading failed for package ‘hypeR’
* removing ‘/private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmptC4QXH/Rinst15db470953649/hypeR’
      -----------------------------------
ERROR: package installation failed