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This page was generated on 2025-01-23 12:12 -0500 (Thu, 23 Jan 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.1 LTS)x86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4746
palomino8Windows Server 2022 Datacenterx644.4.2 (2024-10-31 ucrt) -- "Pile of Leaves" 4493
merida1macOS 12.7.5 Montereyx86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4517
kjohnson1macOS 13.6.6 Venturaarm644.4.2 (2024-10-31) -- "Pile of Leaves" 4469
taishanLinux (openEuler 24.03 LTS)aarch644.4.2 (2024-10-31) -- "Pile of Leaves" 4394
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 852/2289HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ggkegg 1.4.0  (landing page)
Noriaki Sato
Snapshot Date: 2025-01-20 13:00 -0500 (Mon, 20 Jan 2025)
git_url: https://git.bioconductor.org/packages/ggkegg
git_branch: RELEASE_3_20
git_last_commit: 17630e2
git_last_commit_date: 2024-10-29 11:23:07 -0500 (Tue, 29 Oct 2024)
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
taishanLinux (openEuler 24.03 LTS) / aarch64  OK    ERROR  skipped

BUILD results for ggkegg on taishan

To the developers/maintainers of the ggkegg package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ggkegg.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.
- See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host.

raw results


Summary

Package: ggkegg
Version: 1.4.0
Command: /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data ggkegg
StartedAt: 2025-01-21 00:15:23 -0000 (Tue, 21 Jan 2025)
EndedAt: 2025-01-21 00:15:51 -0000 (Tue, 21 Jan 2025)
EllapsedTime: 28.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data ggkegg
###
##############################################################################
##############################################################################


* checking for file ‘ggkegg/DESCRIPTION’ ... OK
* preparing ‘ggkegg’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘usage_of_ggkegg.Rmd’ using rmarkdown

Quitting from lines 35-40 [pathway1] (usage_of_ggkegg.Rmd)
Error: processing vignette 'usage_of_ggkegg.Rmd' failed with diagnostics:
not all 'rnames' found or unique.
--- failed re-building ‘usage_of_ggkegg.Rmd’

SUMMARY: processing the following file failed:
  ‘usage_of_ggkegg.Rmd’

Error: Vignette re-building failed.
Execution halted