Farhad Shokoohi
| Snapshot Date: 2024-12-19 13:00 -0500 (Thu, 19 Dec 2024) |
| git_url: https://git.bioconductor.org/packages/fmrs |
| git_branch: RELEASE_3_20 |
| git_last_commit: 2e192f4 |
| git_last_commit_date: 2024-10-29 10:48:06 -0500 (Tue, 29 Oct 2024) |
| Back to Multiple platform build/check report for BioC 3.20: simplified long |
|
This page was generated on 2024-12-23 12:05 -0500 (Mon, 23 Dec 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.2 (2024-10-31) -- "Pile of Leaves" | 4744 |
| palomino8 | Windows Server 2022 Datacenter | x64 | 4.4.2 (2024-10-31 ucrt) -- "Pile of Leaves" | 4487 |
| merida1 | macOS 12.7.5 Monterey | x86_64 | 4.4.2 (2024-10-31) -- "Pile of Leaves" | 4515 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.4.2 (2024-10-31) -- "Pile of Leaves" | 4467 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 751/2289 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| fmrs 1.16.0 (landing page) Farhad Shokoohi
| nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino8 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.5 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
|
To the developers/maintainers of the fmrs package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/fmrs.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: fmrs |
| Version: 1.16.0 |
| Command: rm -rf fmrs.buildbin-libdir && mkdir fmrs.buildbin-libdir && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD INSTALL --build --library=fmrs.buildbin-libdir fmrs_1.16.0.tar.gz |
| StartedAt: 2024-12-20 08:10:59 -0500 (Fri, 20 Dec 2024) |
| EndedAt: 2024-12-20 08:11:26 -0500 (Fri, 20 Dec 2024) |
| EllapsedTime: 26.7 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: fmrs_1.16.0.zip |
| PackageFileSize: 208.6 KiB |
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### Running command:
###
### rm -rf fmrs.buildbin-libdir && mkdir fmrs.buildbin-libdir && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD INSTALL --build --library=fmrs.buildbin-libdir fmrs_1.16.0.tar.gz
###
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* installing *source* package 'fmrs' ...
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 13.3.0'
gcc -I"F:/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c fmrs.c -o fmrs.o
fmrs.c: In function 'FMR_Weibl_MLE':
fmrs.c:1497:12: warning: variable 'multX' set but not used [-Wunused-but-set-variable]
1497 | double multX[N][D][K];
| ^~~~~
fmrs.c: In function 'FMR_Weibl_CTun':
fmrs.c:2566:12: warning: variable 'pi_new' set but not used [-Wunused-but-set-variable]
2566 | double pi_new[K];
| ^~~~~~
fmrs.c:2547:12: warning: variable 'multX' set but not used [-Wunused-but-set-variable]
2547 | double multX[N][D][k1];
| ^~~~~
fmrs.c: In function 'Norm_MLE':
fmrs.c:2981:10: warning: variable 'sumwi' set but not used [-Wunused-but-set-variable]
2981 | double sumwi[K];
| ^~~~~
fmrs.c: In function 'Weibl_MLE':
fmrs.c:4056:10: warning: variable 'multX' set but not used [-Wunused-but-set-variable]
4056 | double multX[N][D][K];
| ^~~~~
fmrs.c: In function 'Weibl_CTun':
fmrs.c:5031:10: warning: variable 'select' set but not used [-Wunused-but-set-variable]
5031 | double select[D][K];
| ^~~~~~
fmrs.c:5007:10: warning: variable 'multX' set but not used [-Wunused-but-set-variable]
5007 | double multX[N][D][k1];
| ^~~~~
fmrs.c: In function 'backsub':
fmrs.c:59:26: warning: '*atemp[<unknown>][n]' may be used uninitialized [-Wmaybe-uninitialized]
59 | y[n-1] = atemp[n - 1][n] / atemp[n - 1][n - 1];
| ~~~~~~~~~~~~^~~
fmrs.c:59:44: warning: '*atemp[<unknown>][<unknown>]' may be used uninitialized [-Wmaybe-uninitialized]
59 | y[n-1] = atemp[n - 1][n] / atemp[n - 1][n - 1];
| ~~~~~~~~~~~~^~~~~~~
gcc -shared -s -static-libgcc -o fmrs.dll tmp.def fmrs.o -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.20-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.20-bioc/meat/fmrs.buildbin-libdir/00LOCK-fmrs/00new/fmrs/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'fmrs' as fmrs_1.16.0.zip
* DONE (fmrs)