Jianhong Ou
| Snapshot Date: 2026-04-24 13:40 -0400 (Fri, 24 Apr 2026) |
| git_url: https://git.bioconductor.org/packages/enhancerHomologSearch |
| git_branch: devel |
| git_last_commit: aec9810 |
| git_last_commit_date: 2025-10-29 11:11:19 -0400 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-04-25 11:35 -0400 (Sat, 25 Apr 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.4 LTS) | x86_64 | 4.6.0 RC (2026-04-17 r89917) -- "Because it was There" | 4978 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.6.0 alpha (2026-04-08 r89818) | 4722 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 677/2415 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| enhancerHomologSearch 1.17.0 (landing page) Jianhong Ou
| nebbiolo1 | Linux (Ubuntu 24.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | ERROR | skipped | skipped | |||||||||
| See other builds for enhancerHomologSearch in R Universe. | ||||||||||||||
|
To the developers/maintainers of the enhancerHomologSearch package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/enhancerHomologSearch.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: enhancerHomologSearch |
| Version: 1.17.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data enhancerHomologSearch |
| StartedAt: 2026-04-24 16:23:00 -0400 (Fri, 24 Apr 2026) |
| EndedAt: 2026-04-24 16:26:23 -0400 (Fri, 24 Apr 2026) |
| EllapsedTime: 203.2 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data enhancerHomologSearch
###
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* checking for file ‘enhancerHomologSearch/DESCRIPTION’ ... OK
* preparing ‘enhancerHomologSearch’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package (it is needed to build vignettes)
* creating vignettes ... ERROR
--- re-building ‘enhancerHomologSearch.Rmd’ using rmarkdown
Quitting from enhancerHomologSearch.Rmd:138-149 [unnamed-chunk-4]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `queryEncode()`:
! Server error: (504) Gateway Timeout
---
Backtrace:
▆
1. └─enhancerHomologSearch::getENCODEdata(genome = Hsapiens, partialMatch = c(biosample_summary = "heart"))
2. └─enhancerHomologSearch::queryEncode(exactMatch = exactMatch, ...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'enhancerHomologSearch.Rmd' failed with diagnostics:
Server error: (504) Gateway Timeout
--- failed re-building ‘enhancerHomologSearch.Rmd’
SUMMARY: processing the following file failed:
‘enhancerHomologSearch.Rmd’
Error: Vignette re-building failed.
Execution halted