##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL destiny
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library’
* installing *source* package ‘destiny’ ...
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using C++11
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/RcppEigen/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/grDevices/include' -I/opt/R/x86_64/include   -ggdb -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/RcppEigen/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/grDevices/include' -I/opt/R/x86_64/include   -ggdb -fPIC  -falign-functions=64 -Wall -g -O2   -c censoring.cpp -o censoring.o
censoring.cpp:57:14: warning: variable 'm0' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
                } else if (!one_uncertain && one_missing) {
                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
censoring.cpp:68:19: note: uninitialized use occurs here
                        * ( std::erfc((m0-v) / sigma) - std::erfc((m1-v) / sigma) )
                                       ^~
censoring.cpp:57:10: note: remove the 'if' if its condition is always true
                } else if (!one_uncertain && one_missing) {
                       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
censoring.cpp:57:14: warning: variable 'm0' is used uninitialized whenever '&&' condition is false [-Wsometimes-uninitialized]
                } else if (!one_uncertain && one_missing) {
                           ^~~~~~~~~~~~~~
censoring.cpp:68:19: note: uninitialized use occurs here
                        * ( std::erfc((m0-v) / sigma) - std::erfc((m1-v) / sigma) )
                                       ^~
censoring.cpp:57:14: note: remove the '&&' if its condition is always true
                } else if (!one_uncertain && one_missing) {
                           ^~~~~~~~~~~~~~~~~
censoring.cpp:52:12: note: initialize the variable 'm0' to silence this warning
                double m0, m1;
                         ^
                          = 0.0
censoring.cpp:57:14: warning: variable 'm1' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
                } else if (!one_uncertain && one_missing) {
                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
censoring.cpp:68:47: note: uninitialized use occurs here
                        * ( std::erfc((m0-v) / sigma) - std::erfc((m1-v) / sigma) )
                                                                   ^~
censoring.cpp:57:10: note: remove the 'if' if its condition is always true
                } else if (!one_uncertain && one_missing) {
                       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
censoring.cpp:57:14: warning: variable 'm1' is used uninitialized whenever '&&' condition is false [-Wsometimes-uninitialized]
                } else if (!one_uncertain && one_missing) {
                           ^~~~~~~~~~~~~~
censoring.cpp:68:47: note: uninitialized use occurs here
                        * ( std::erfc((m0-v) / sigma) - std::erfc((m1-v) / sigma) )
                                                                   ^~
censoring.cpp:57:14: note: remove the '&&' if its condition is always true
                } else if (!one_uncertain && one_missing) {
                           ^~~~~~~~~~~~~~~~~
censoring.cpp:52:16: note: initialize the variable 'm1' to silence this warning
                double m0, m1;
                             ^
                              = 0.0
censoring.cpp:57:14: warning: variable 'use_d' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
                } else if (!one_uncertain && one_missing) {
                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
censoring.cpp:63:20: note: uninitialized use occurs here
                const double v = use_d ? d : c;
                                 ^~~~~
censoring.cpp:57:10: note: remove the 'if' if its condition is always true
                } else if (!one_uncertain && one_missing) {
                       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
censoring.cpp:57:14: warning: variable 'use_d' is used uninitialized whenever '&&' condition is false [-Wsometimes-uninitialized]
                } else if (!one_uncertain && one_missing) {
                           ^~~~~~~~~~~~~~
censoring.cpp:63:20: note: uninitialized use occurs here
                const double v = use_d ? d : c;
                                 ^~~~~
censoring.cpp:57:14: note: remove the '&&' if its condition is always true
                } else if (!one_uncertain && one_missing) {
                           ^~~~~~~~~~~~~~~~~
censoring.cpp:18:12: note: initialize the variable 'use_d' to silence this warning
        bool use_d;
                  ^
                   = false
6 warnings generated.
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/RcppEigen/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/grDevices/include' -I/opt/R/x86_64/include   -ggdb -fPIC  -falign-functions=64 -Wall -g -O2   -c utils.cpp -o utils.o
clang++ -arch x86_64 -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o destiny.so RcppExports.o censoring.o utils.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/00LOCK-destiny/00new/destiny/libs
** R
** data
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (destiny)